RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 TERF2Q15554 542 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 PTPN21Q16825 1174 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 SPECC1LQ69YQ0 1117 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 KANK3Q6NY19 840 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 DZIP3Q86Y13 1208 aaKnown RBP8.3□□□□□ -1.08
SMG1-210ENST00000565224 ZNF34Q8IZ26 560 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 LCORLQ8N3X6 602 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 MPHOSPH8Q99549 860 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 ZKSCAN3Q9BRR0 538 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 RNF41Q9H4P4 317 aaPredicted RBP8.3□□□□□ -1.08
SMG1-210ENST00000565224 ARGLU1Q9NWB6 273 aaPredicted RBP8.3□□□□□ -1.08
SMG1-210ENST00000565224 PCDHB6Q9Y5E3 794 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 ARAP2Q8WZ64 1704 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 BCL9O00512 1426 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 FANCGO15287 622 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 ACTN4O43707 911 aaKnown RBP8.3□□□□□ -1.08
SMG1-210ENST00000565224 STX10O60499 249 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 TADA3O75528 432 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 IL6STP40189 918 aaPredicted RBP8.3□□□□□ -1.08
SMG1-210ENST00000565224 PDE4CQ08493 712 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 NR5A1Q13285 461 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 HSP90AA4PQ58FG1 418 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 PDILTQ8N807 584 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 FANCBQ8NB91 859 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 ANKRD36CQ5JPF3 1778 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 GOLGB1Q14789 3259 aaKnown RBP8.3□□□□□ -1.08
SMG1-210ENST00000565224 ABCA3Q99758 1704 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 MYH3P11055 1940 aa8.3□□□□□ -1.08
SMG1-210ENST00000565224 EFCAB8A8MWE9 144 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 TPM1P09493 284 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 ERCC5P28715 1186 aaPredicted RBP8.29□□□□□ -1.08
SMG1-210ENST00000565224 PLCD1P51178 756 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 TRMT44Q8IYL2 757 aaKnown RBP8.29□□□□□ -1.08
SMG1-210ENST00000565224 ZNF654Q8IZM8 581 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 CCDC82Q8N4S0 544 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 TC2NQ8N9U0 490 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 NUP133Q8WUM0 1156 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 CCDC34Q96HJ3 373 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 UBAC1Q9BSL1 405 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 RAI14Q9P0K7 980 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 MYO5AQ9Y4I1 1855 aaKnown RBP8.29□□□□□ -1.08
SMG1-210ENST00000565224 UTRNP46939 3433 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 COL22A1Q8NFW1 1626 aaPredicted RBP8.29□□□□□ -1.08
SMG1-210ENST00000565224 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.29□□□□□ -1.08
SMG1-210ENST00000565224 SNAP23O00161 211 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 CASQ1P31415 396 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 FAM193AP78312 1265 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 PPARAQ07869 468 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 GRAMD1CQ8IYS0 662 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 CMTR1Q8N1G2 835 aaKnown RBP8.29□□□□□ -1.08
SMG1-210ENST00000565224 SPATA20Q8TB22 786 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 OXER1Q8TDS5 423 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 CARD6Q9BX69 1037 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 RNF26Q9BY78 433 aaPredicted RBP8.29□□□□□ -1.08
SMG1-210ENST00000565224 CSRNP2Q9H175 543 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 CABP5Q9NP86 173 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 FHOD1Q9Y613 1164 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 RTL9Q8NET4 1388 aa8.29□□□□□ -1.08
SMG1-210ENST00000565224 DOCK2Q92608 1830 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 PNMA6AP0CW24 399 aaPredicted RBP8.28□□□□□ -1.08
SMG1-210ENST00000565224 XBP1P17861 261 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 ATP2B1P20020 1258 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 BCAMP50895 628 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 ADKP55263 362 aaKnown RBP8.28□□□□□ -1.08
SMG1-210ENST00000565224 GNG11P61952 73 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 NR1I3Q14994 352 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 PPP2R5BQ15173 497 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 CT47A1Q5JQC4 288 aaPredicted RBP8.28□□□□□ -1.08
SMG1-210ENST00000565224 TOGARAM2Q6ZUX3 1019 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 MIGA1Q8NAN2 632 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 MED15Q96RN5 788 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 SAMSN1Q9NSI8 373 aaKnown RBP8.28□□□□□ -1.08
SMG1-210ENST00000565224 AATFQ9NY61 560 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMG1-210ENST00000565224 SPATA31A6Q5VVP1 1343 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 TRIM75PA6NK02 468 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 ZRANB2O95218 330 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMG1-210ENST00000565224 AKAP17AQ02040 695 aaKnown RBP8.28□□□□□ -1.08
SMG1-210ENST00000565224 SUSD4Q5VX71 490 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 CREBRFQ8IUR6 639 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 FAM177A1Q8N128 213 aaPredicted RBP8.28□□□□□ -1.08
SMG1-210ENST00000565224 ESR2Q92731 530 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 WDR24Q96S15 920 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 SEC31BQ9NQW1 1179 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 LRP2BPQ9P2M1 347 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 SLIT2O94813 1529 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 TNKSO95271 1327 aa8.28□□□□□ -1.08
SMG1-210ENST00000565224 KCNA4P22459 653 aa8.27□□□□□ -1.09
SMG1-210ENST00000565224 IGHMBP2P38935 993 aaKnown RBP8.27□□□□□ -1.09
SMG1-210ENST00000565224 MAP3K9P80192 1104 aa8.27□□□□□ -1.09
SMG1-210ENST00000565224 SEC23AQ15436 765 aa8.27□□□□□ -1.09
SMG1-210ENST00000565224 CCDC152Q4G0S7 254 aa8.27□□□□□ -1.09
SMG1-210ENST00000565224 TAF3Q5VWG9 929 aa8.27□□□□□ -1.09
SMG1-210ENST00000565224 POTEAQ6S8J7 498 aa8.27□□□□□ -1.09
SMG1-210ENST00000565224 USP49Q70CQ1 688 aa8.27□□□□□ -1.09
SMG1-210ENST00000565224 ILDR2Q71H61 639 aa8.27□□□□□ -1.09
SMG1-210ENST00000565224 DHX58Q96C10 678 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms