RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 NBPF11Q86T75 865 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 ANKRD13CQ8N6S4 541 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 WDR18Q9BV38 432 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 BOLA2Q9H3K6 86 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 AS3MTQ9HBK9 375 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 ZBTB21Q9ULJ3 1066 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 NAV1Q8NEY1 1877 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 MAGEB6P1A0A0J9YX57 407 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 SMARCA5O60264 1052 aaPredicted RBP12.17□□□□□ -0.46
CMTM3-209ENST00000565003 ATP5JP18859 108 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 HOXD10P28358 340 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 BACE1P56817 501 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 EVX2Q03828 476 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 TATDN1Q6P1N9 297 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 LCORLQ8N3X6 602 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 LRRCC1Q9C099 1032 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 EHD4Q9H223 541 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 PAG1Q9NWQ8 432 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 PNMA3Q9UL41 463 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 GABRQQ9UN88 632 aa12.17□□□□□ -0.46
CMTM3-209ENST00000565003 GH2P01242 217 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 CHGBP05060 677 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 GRK4P32298 578 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 PLCD1P51178 756 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 FAM110CQ1W6H9 321 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 RAET1EQ8TD07 263 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 HAUS7Q99871 368 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 ASCC2Q9H1I8 757 aaPredicted RBP12.16□□□□□ -0.46
CMTM3-209ENST00000565003 GINM1Q9NU53 330 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 SERPINB13Q9UIV8 391 aa12.16□□□□□ -0.46
CMTM3-209ENST00000565003 MKI67P46013 3256 aaKnown RBP12.15□□□□□ -0.46
CMTM3-209ENST00000565003 USP17L10C9JJH3 530 aa12.15□□□□□ -0.46
CMTM3-209ENST00000565003 TNPO2O14787 897 aaKnown RBP12.15□□□□□ -0.46
CMTM3-209ENST00000565003 ADD2P35612 726 aa12.15□□□□□ -0.46
CMTM3-209ENST00000565003 FLT3LGP49771 235 aa12.15□□□□□ -0.46
CMTM3-209ENST00000565003 MTFR1Q15390 333 aa12.15□□□□□ -0.46
CMTM3-209ENST00000565003 TTC6Q86TZ1 520 aa12.15□□□□□ -0.46
CMTM3-209ENST00000565003 SDR42E1Q8WUS8 393 aa12.15□□□□□ -0.46
CMTM3-209ENST00000565003 CRNKL1Q9BZJ0 848 aaKnown RBP12.15□□□□□ -0.46
CMTM3-209ENST00000565003 MCM9Q9NXL9 1143 aa12.15□□□□□ -0.46
CMTM3-209ENST00000565003 TMOD4Q9NZQ9 345 aa12.15□□□□□ -0.46
CMTM3-209ENST00000565003 C19orf81C9J6K1 198 aa12.14□□□□□ -0.47
CMTM3-209ENST00000565003 PEX10O60683 326 aa12.14□□□□□ -0.47
CMTM3-209ENST00000565003 SHMT1P34896 483 aa12.14□□□□□ -0.47
CMTM3-209ENST00000565003 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
CMTM3-209ENST00000565003 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
CMTM3-209ENST00000565003 GABPAQ06546 454 aa12.14□□□□□ -0.47
CMTM3-209ENST00000565003 PABPC4Q13310 644 aaKnown RBP eCLIP12.14□□□□□ -0.47
CMTM3-209ENST00000565003 PRPF38BQ5VTL8 546 aaKnown RBP12.14□□□□□ -0.47
CMTM3-209ENST00000565003 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
CMTM3-209ENST00000565003 DCP1AQ9NPI6 582 aaPredicted RBP12.14□□□□□ -0.47
CMTM3-209ENST00000565003 EMILIN3Q9NT22 766 aa12.14□□□□□ -0.47
CMTM3-209ENST00000565003 DOCK3Q8IZD9 2030 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 PRKAB2O43741 272 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 ADCY3O60266 1144 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 MBD4O95243 580 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 POLR3DP05423 398 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-209ENST00000565003 CYP2D6P10635 497 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-209ENST00000565003 RAB3GAP1Q15042 981 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
CMTM3-209ENST00000565003 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-209ENST00000565003 TSHZ3Q63HK5 1081 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 SHISA4Q96DD7 197 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 MYH7P12883 1935 aa12.13□□□□□ -0.47
CMTM3-209ENST00000565003 CCL5P13501 91 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 ELNP15502 786 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 GUCY1A2P33402 732 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 RRP1P56182 461 aaKnown RBP12.12□□□□□ -0.47
CMTM3-209ENST00000565003 IRF5Q13568 498 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 ABCB5Q2M3G0 1257 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 SLC44A5Q8NCS7 719 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 P2RX7Q99572 595 aaKnown RBP12.12□□□□□ -0.47
CMTM3-209ENST00000565003 FEZ1Q99689 392 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.12□□□□□ -0.47
CMTM3-209ENST00000565003 TXNRD2Q9NNW7 524 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 MORF4L1Q9UBU8 362 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 BIN2Q9UBW5 565 aaPredicted RBP12.12□□□□□ -0.47
CMTM3-209ENST00000565003 PCDHB15Q9Y5E8 787 aa12.12□□□□□ -0.47
CMTM3-209ENST00000565003 SMIM22K7EJ46 135 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 HERVK_113P62684 666 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 SEPT2Q15019 361 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 USP17L2Q6R6M4 530 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 COA7Q96BR5 231 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 C12orf42Q96LP6 360 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 KIAA1683Q9H0B3 1180 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 PUS7LQ9H0K6 701 aaKnown RBP12.11□□□□□ -0.47
CMTM3-209ENST00000565003 UNC93B1Q9H1C4 597 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
CMTM3-209ENST00000565003 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
CMTM3-209ENST00000565003 CYP2D7A0A087X1C5 515 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms