RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 THEMIS2Q5TEJ8 643 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 IFFO2Q5TF58 517 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 GIMAP6Q6P9H5 292 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 TRIM65Q6PJ69 517 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 ZNF365Q70YC5 407 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 DZIP1Q86YF9 867 aaKnown RBP7.05□□□□□ -1.28
PTPN9-204ENST00000564970 SLF2Q8IX21 1173 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 ARFGAP2Q8N6H7 521 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 ANKRD44Q8N8A2 993 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 KRI1Q8N9T8 703 aaKnown RBP7.05□□□□□ -1.28
PTPN9-204ENST00000564970 RASSF8Q8NHQ8 419 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 PRAM1Q96QH2 718 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 CORO1BQ9BR76 489 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 PHACTR1Q9C0D0 580 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 DCTPP1Q9H773 170 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 TBCCD1Q9NVR7 557 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 TUBGCP4Q9UGJ1 667 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.05□□□□□ -1.28
PTPN9-204ENST00000564970 KDM2AQ9Y2K7 1162 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 SH3GLB1Q9Y371 365 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 CHMP3Q9Y3E7 222 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 NSD2O96028 1365 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 CPSF1Q10570 1443 aaKnown RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 PALM3A6NDB9 673 aaPredicted RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 USP27XA6NNY8 438 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 M0R2C6 588 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 LSM1O15116 133 aaKnown RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 P4HA2O15460 535 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 GADD45BO75293 160 aaPredicted RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 ECM2O94769 699 aaPredicted RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 BAG3O95817 575 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 ATP4AP20648 1035 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 S100A1P23297 94 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 TMF1P82094 1093 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 SEPT6Q14141 434 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 SUZ12Q15022 739 aaKnown RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC144BQ3MJ40 725 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC153Q494R4 210 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 ALS2CLQ60I27 953 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 CREB3L3Q68CJ9 461 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC70Q6NSX1 233 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 CACNA2D4Q7Z3S7 1137 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 UBE3BQ7Z3V4 1068 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC144CPQ8IYA2 1237 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 CEP57L1Q8IYX8 460 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 NSMCE1Q8WV22 266 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 SREK1Q8WXA9 508 aaKnown RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 IFT81Q8WYA0 676 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 LRRC45Q96CN5 670 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 NAF1Q96HR8 494 aaKnown RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 UPF3BQ9BZI7 483 aaKnown RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 EPN3Q9H201 632 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 HELLSQ9NRZ9 838 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 SCHIP1Q9P0W5 487 aaPredicted RBP7.04□□□□□ -1.28
PTPN9-204ENST00000564970 PCDH10Q9P2E7 1040 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 CDC23Q9UJX2 597 aa7.04□□□□□ -1.28
PTPN9-204ENST00000564970 ST20-MTHFSA0A0A6YYL1 179 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 MYO1FO00160 1098 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 SLC27A2O14975 620 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 STX6O43752 255 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 MGEA5O60502 916 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 CUTAO60888 179 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 WFS1O76024 890 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 FOSL1P15407 271 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 HSPA1LP34931 641 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 CTCFP49711 727 aaPredicted RBP7.03□□□□□ -1.28
PTPN9-204ENST00000564970 GNAQP50148 359 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 TUBA1BP68363 451 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 STIM1Q13586 685 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 SEPT7Q16181 437 aaKnown RBP7.03□□□□□ -1.28
PTPN9-204ENST00000564970 ALDH1L2Q3SY69 923 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC14Q49A88 953 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 TTC22Q5TAA0 569 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 RC3H1Q5TC82 1133 aaKnown RBP7.03□□□□□ -1.28
PTPN9-204ENST00000564970 THOC7Q6I9Y2 204 aaKnown RBP7.03□□□□□ -1.28
PTPN9-204ENST00000564970 OLFML1Q6UWY5 402 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 ATF7IPQ6VMQ6 1270 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 GIGYF2Q6Y7W6 1299 aaKnown RBP7.03□□□□□ -1.28
PTPN9-204ENST00000564970 TUBA1AQ71U36 451 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC83Q8IWF9 413 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 EHBP1Q8NDI1 1231 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 STKLD1Q8NE28 680 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC148Q8NFR7 591 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 COG1Q8WTW3 980 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 GIMAP1Q8WWP7 306 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 KCNN1Q92952 543 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 NACC2Q96BF6 587 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 ZSCAN31Q96LW9 406 aaPredicted RBP7.03□□□□□ -1.28
PTPN9-204ENST00000564970 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 YIPF3Q9GZM5 350 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 SIL1Q9H173 461 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 MRPL46Q9H2W6 279 aaKnown RBP7.03□□□□□ -1.28
PTPN9-204ENST00000564970 CENPHQ9H3R5 247 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 TRMT1Q9NXH9 659 aaKnown RBP7.03□□□□□ -1.28
PTPN9-204ENST00000564970 HOXC10Q9NYD6 342 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 IL20Q9NYY1 176 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 LARSQ9P2J5 1176 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms