RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SLC16A2P36021 539 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 STX17P56962 302 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 SPICE1Q8N0Z3 855 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 PHLPP2Q6ZVD8 1323 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 TDO2P48775 406 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 LONRF3Q496Y0 759 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 HPS3Q969F9 1004 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 RTEL1Q9NZ71 1219 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 AKAP2Q9Y2D5 859 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 AFF2P51816 1311 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 CHD9Q3L8U1 2897 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 RREB1Q92766 1687 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 STXBP4Q6ZWJ1 553 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 STAG2Q8N3U4 1231 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 BBXQ8WY36 941 aaPredicted RBP3.84□□□□□ -1.8
CHD9-213ENST00000564845 AIDAQ96BJ3 306 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 NACAP1Q9BZK3 213 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 CFAP45Q9UL16 551 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 LTBP4Q8N2S1 1624 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 GOLGA8BA8MQT2 603 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 C6orf229H3BNL8 230 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 APBA3O96018 575 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 ME1P48163 572 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 FAM193AP78312 1265 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 CCDC91Q7Z6B0 441 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 KIAA0825Q8IV33 1275 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 RAD50Q92878 1312 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 CEP131Q9UPN4 1083 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 MYO5AQ9Y4I1 1855 aaKnown RBP3.84□□□□□ -1.8
CHD9-213ENST00000564845 CLRN2A0PK11 232 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 ZNF213O14771 459 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 SNX16P57768 344 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 MCMDC2Q4G0Z9 681 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 KLHL10Q6JEL2 608 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 ZFPM1Q8IX07 1006 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 C10orf67Q8IYJ2 551 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 TGFBRAP1Q8WUH2 860 aa3.84□□□□□ -1.8
CHD9-213ENST00000564845 ZBTB7AO95365 584 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 AFMP43652 599 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 MIGA2Q7L4E1 593 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 USP28Q96RU2 1077 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 BCL2L12Q9HB09 334 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 LCMT1Q9UIC8 334 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 STX8Q9UNK0 236 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 ABCC12Q96J65 1359 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 ANKRD18BA2A2Z9 1011 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 PRC1O43663 620 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 ANTXR2P58335 489 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 PNOCQ13519 176 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 CUL4AQ13619 759 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 SKIDA1Q1XH10 827 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 TMTC2Q8N394 836 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 CPLX3Q8WVH0 158 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 SHISA4Q96DD7 197 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 BLZF1Q9H2G9 400 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 KANSL2Q9H9L4 492 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 NUP188Q5SRE5 1749 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 H7C1W4 665 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 MPHOSPH10O00566 681 aaKnown RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 NOLC1Q14978 699 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHD9-213ENST00000564845 MAP9Q49MG5 647 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 TTC14Q96N46 770 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 EPC1Q9H2F5 836 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 NEMFO60524 1076 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 PTGS1P23219 599 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 ANO6Q4KMQ2 910 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 NUP88Q99567 741 aaPredicted RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 FUCA2Q9BTY2 467 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 TAOK3Q9H2K8 898 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 USP17L12C9JPN9 530 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 USP17L21D6R901 530 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 RPS6KB1P23443 525 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 EZH2Q15910 746 aaKnown RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 PROM2Q8N271 834 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 ZBTB38Q8NAP3 1195 aaPredicted RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 UBA5Q9GZZ9 404 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 SPATA31A1Q5TZJ5 1347 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 CACNB1Q02641 598 aaPredicted RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 CLIP2Q9UDT6 1046 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 USP27XA6NNY8 438 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 ZPR1O75312 459 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 F13A1P00488 732 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 FDPSP14324 419 aaKnown RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 TTF1Q15361 905 aaPredicted RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 ODF2Q5BJF6 829 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 SPATA5Q8NB90 893 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 CARD10Q9BWT7 1032 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 CCDC87Q9NVE4 849 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 PKD2L1Q9P0L9 805 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 HDAC9Q9UKV0 1011 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 SOS2Q07890 1332 aaPredicted RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 SPDYE4A6NLX3 237 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 BTBD18B2RXH4 712 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 ZSCAN22P10073 491 aaPredicted RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 C11orf57Q6ZUT1 292 aaPredicted RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 SNX21Q969T3 373 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 SPATA32Q96LK8 384 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 CCDC43Q96MW1 224 aaKnown RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 GOLGA6L10A6NI86 522 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 TNNT3P45378 269 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms