RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 AACSQ86V21 672 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 RPAP2Q8IXW5 612 aaPredicted RBP22.52■■□□□ 1.2
CLN6-204ENST00000564752 MAGEB6Q8N7X4 407 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 MIGA1Q8NAN2 632 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 ANTXR1Q9H6X2 564 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 C19orf81C9J6K1 198 aa22.51■■□□□ 1.19
CLN6-204ENST00000564752 GDF11O95390 407 aa22.51■■□□□ 1.19
CLN6-204ENST00000564752 INHAP05111 366 aa22.51■■□□□ 1.19
CLN6-204ENST00000564752 HOXA7P31268 230 aaPredicted RBP22.51■■□□□ 1.19
CLN6-204ENST00000564752 PDE3AQ14432 1141 aa22.51■■□□□ 1.19
CLN6-204ENST00000564752 SHROOM1Q2M3G4 852 aaPredicted RBP22.51■■□□□ 1.19
CLN6-204ENST00000564752 U2AF1L4Q8WU68 220 aaKnown RBP22.51■■□□□ 1.19
CLN6-204ENST00000564752 TMOD4Q9NZQ9 345 aa22.51■■□□□ 1.19
CLN6-204ENST00000564752 USP17L10C9JJH3 530 aa22.5■■□□□ 1.19
CLN6-204ENST00000564752 SGPL1O95470 568 aa22.5■■□□□ 1.19
CLN6-204ENST00000564752 MAP3K12Q12852 859 aa22.5■■□□□ 1.19
CLN6-204ENST00000564752 C20orf194Q5TEA3 1177 aa22.5■■□□□ 1.19
CLN6-204ENST00000564752 RHPN1Q8TCX5 695 aa22.5■■□□□ 1.19
CLN6-204ENST00000564752 ZBTB21Q9ULJ3 1066 aa22.5■■□□□ 1.19
CLN6-204ENST00000564752 H0YGN5 161 aa22.49■■□□□ 1.19
CLN6-204ENST00000564752 USP5P45974 858 aa22.49■■□□□ 1.19
CLN6-204ENST00000564752 P2RX7Q99572 595 aaKnown RBP22.49■■□□□ 1.19
CLN6-204ENST00000564752 IL1RAPL2Q9NP60 686 aa22.49■■□□□ 1.19
CLN6-204ENST00000564752 MORF4L1Q9UBU8 362 aa22.49■■□□□ 1.19
CLN6-204ENST00000564752 GJD2Q9UKL4 321 aa22.49■■□□□ 1.19
CLN6-204ENST00000564752 MGAMO43451 1857 aa22.49■■□□□ 1.19
CLN6-204ENST00000564752 MYO5AQ9Y4I1 1855 aaKnown RBP22.49■■□□□ 1.19
CLN6-204ENST00000564752 SIPA1L1O43166 1804 aa22.48■■□□□ 1.19
CLN6-204ENST00000564752 CEP290O15078 2479 aa22.48■■□□□ 1.19
CLN6-204ENST00000564752 FXR1P51114 621 aaKnown RBP eCLIP22.48■■□□□ 1.19
CLN6-204ENST00000564752 IRX3P78415 501 aaPredicted RBP22.48■■□□□ 1.19
CLN6-204ENST00000564752 TATDN1Q6P1N9 297 aa22.48■■□□□ 1.19
CLN6-204ENST00000564752 DPF3Q92784 378 aa22.48■■□□□ 1.19
CLN6-204ENST00000564752 TAOK2Q9UL54 1235 aa22.48■■□□□ 1.19
CLN6-204ENST00000564752 COLQQ9Y215 455 aaPredicted RBP22.48■■□□□ 1.19
CLN6-204ENST00000564752 LOC285556D6RIA3 1793 aa22.48■■□□□ 1.19
CLN6-204ENST00000564752 CAPN2P17655 700 aa22.47■■□□□ 1.19
CLN6-204ENST00000564752 EHD4Q9H223 541 aa22.47■■□□□ 1.19
CLN6-204ENST00000564752 PAK6Q9NQU5 681 aaPredicted RBP22.47■■□□□ 1.19
CLN6-204ENST00000564752 APBB1O00213 710 aa22.46■■□□□ 1.19
CLN6-204ENST00000564752 SIRT2Q8IXJ6 389 aa22.46■■□□□ 1.19
CLN6-204ENST00000564752 KIF1BPQ96EK5 621 aa22.46■■□□□ 1.19
CLN6-204ENST00000564752 HTATIP2Q9BUP3 242 aa22.46■■□□□ 1.19
CLN6-204ENST00000564752 EMILIN3Q9NT22 766 aa22.46■■□□□ 1.19
CLN6-204ENST00000564752 SERPINB13Q9UIV8 391 aa22.46■■□□□ 1.19
CLN6-204ENST00000564752 FARP2O94887 1054 aaPredicted RBP22.45■■□□□ 1.18
CLN6-204ENST00000564752 GH2P01242 217 aa22.45■■□□□ 1.18
CLN6-204ENST00000564752 HERVK_113P62684 666 aa22.45■■□□□ 1.18
CLN6-204ENST00000564752 TTF1Q15361 905 aaPredicted RBP22.45■■□□□ 1.18
CLN6-204ENST00000564752 TTC6Q86TZ1 520 aa22.45■■□□□ 1.18
CLN6-204ENST00000564752 CLASRPQ8N2M8 674 aaKnown RBP22.45■■□□□ 1.18
CLN6-204ENST00000564752 DEFB118Q96PH6 123 aa22.45■■□□□ 1.18
CLN6-204ENST00000564752 RIOK1Q9BRS2 568 aaKnown RBP22.45■■□□□ 1.18
CLN6-204ENST00000564752 ATAD5Q96QE3 1844 aa22.45■■□□□ 1.18
CLN6-204ENST00000564752 TFRCP02786 760 aaKnown RBP22.44■■□□□ 1.18
CLN6-204ENST00000564752 USP17L2Q6R6M4 530 aa22.44■■□□□ 1.18
CLN6-204ENST00000564752 GPRC5AQ8NFJ5 357 aa22.44■■□□□ 1.18
CLN6-204ENST00000564752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.44■■□□□ 1.18
CLN6-204ENST00000564752 TXNRD2Q9NNW7 524 aa22.44■■□□□ 1.18
CLN6-204ENST00000564752 RBPJLQ9UBG7 517 aa22.44■■□□□ 1.18
CLN6-204ENST00000564752 DOCK3Q8IZD9 2030 aa22.43■■□□□ 1.18
CLN6-204ENST00000564752 PEX10O60683 326 aa22.43■■□□□ 1.18
CLN6-204ENST00000564752 HMGCRP04035 888 aa22.43■■□□□ 1.18
CLN6-204ENST00000564752 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
CLN6-204ENST00000564752 CRISPLD2Q9H0B8 497 aa22.43■■□□□ 1.18
CLN6-204ENST00000564752 CDK5RAP2Q96SN8 1893 aa22.43■■□□□ 1.18
CLN6-204ENST00000564752 FOCADQ5VW36 1801 aa22.43■■□□□ 1.18
CLN6-204ENST00000564752 MAGEB6P1A0A0J9YX57 407 aa22.42■■□□□ 1.18
CLN6-204ENST00000564752 RAB11FIP3O75154 756 aa22.42■■□□□ 1.18
CLN6-204ENST00000564752 PDE6AP16499 860 aa22.42■■□□□ 1.18
CLN6-204ENST00000564752 PLCD1P51178 756 aa22.42■■□□□ 1.18
CLN6-204ENST00000564752 CERKLQ49MI3 558 aaPredicted RBP22.42■■□□□ 1.18
CLN6-204ENST00000564752 SLC9C2Q5TAH2 1124 aa22.42■■□□□ 1.18
CLN6-204ENST00000564752 IFIT2P09913 472 aaKnown RBP22.41■■□□□ 1.18
CLN6-204ENST00000564752 Q3C1V9 767 aa22.41■■□□□ 1.18
CLN6-204ENST00000564752 POTEEQ6S8J3 1075 aa22.41■■□□□ 1.18
CLN6-204ENST00000564752 GTF3C2Q8WUA4 911 aaPredicted RBP22.41■■□□□ 1.18
CLN6-204ENST00000564752 C12orf42Q96LP6 360 aa22.41■■□□□ 1.18
CLN6-204ENST00000564752 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.41■■□□□ 1.184e-8■■■■□ 25.2
CLN6-204ENST00000564752 BCL11AQ9H165 835 aa22.41■■□□□ 1.18
CLN6-204ENST00000564752 SHMT1P34896 483 aa22.4■■□□□ 1.18
CLN6-204ENST00000564752 RAB3GAP1Q15042 981 aa22.4■■□□□ 1.18
CLN6-204ENST00000564752 ABCB5Q2M3G0 1257 aa22.4■■□□□ 1.18
CLN6-204ENST00000564752 RPTORQ8N122 1335 aa22.39■■□□□ 1.18
CLN6-204ENST00000564752 ZNF532Q9HCE3 1301 aa22.39■■□□□ 1.18
CLN6-204ENST00000564752 TCRBV5S4A2TA0A5A2 114 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 GOLIM4O00461 696 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 POLR3DP05423 398 aaPredicted RBP22.39■■□□□ 1.17
CLN6-204ENST00000564752 MAPK4P31152 587 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 ERVK-9P63128 1117 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 ERVK-24P63145 666 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 TRIM32Q13049 653 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 DNAJC2Q99543 621 aaKnown RBP22.39■■□□□ 1.17
CLN6-204ENST00000564752 NUDT12Q9BQG2 462 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 CRNKL1Q9BZJ0 848 aaKnown RBP22.39■■□□□ 1.17
CLN6-204ENST00000564752 CABP5Q9NP86 173 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 NR2E3Q9Y5X4 410 aa22.39■■□□□ 1.17
CLN6-204ENST00000564752 RANBP2P49792 3224 aaKnown RBP22.39■■□□□ 1.17
CLN6-204ENST00000564752 USP17L15C9J2P7 530 aa22.38■■□□□ 1.17
CLN6-204ENST00000564752 USP17L13C9JLJ4 530 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms