RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 CYP2E1P05181 493 aaPredicted RBP23.01■■□□□ 1.27
NME3-207ENST00000564628 SH3D19Q5HYK7 790 aa23.01■■□□□ 1.27
NME3-207ENST00000564628 SZT2Q5T011 3432 aa23.01■■□□□ 1.27
NME3-207ENST00000564628 ATAD5Q96QE3 1844 aa23.01■■□□□ 1.27
NME3-207ENST00000564628 USP17L5A8MUK1 530 aa23■■□□□ 1.27
NME3-207ENST00000564628 EVI5O60447 810 aa23■■□□□ 1.27
NME3-207ENST00000564628 IGSF3O75054 1194 aa23■■□□□ 1.27
NME3-207ENST00000564628 IFIT2P09913 472 aaKnown RBP23■■□□□ 1.27
NME3-207ENST00000564628 HMGCS2P54868 508 aa23■■□□□ 1.27
NME3-207ENST00000564628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23■■□□□ 1.27
NME3-207ENST00000564628 AS3MTQ9HBK9 375 aa23■■□□□ 1.27
NME3-207ENST00000564628 ZAP70P43403 619 aa22.99■■□□□ 1.27
NME3-207ENST00000564628 HDAC1Q13547 482 aaPredicted RBP22.99■■□□□ 1.27
NME3-207ENST00000564628 RRP1BQ14684 758 aaKnown RBP22.99■■□□□ 1.27
NME3-207ENST00000564628 TEX11Q8IYF3 940 aa22.99■■□□□ 1.27
NME3-207ENST00000564628 EXOC6Q8TAG9 804 aa22.99■■□□□ 1.27
NME3-207ENST00000564628 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.99■■□□□ 1.271e-12■■□□□ 11.8
NME3-207ENST00000564628 ASCC2Q9H1I8 757 aaPredicted RBP22.99■■□□□ 1.27
NME3-207ENST00000564628 DHX36Q9H2U1 1008 aaKnown RBP22.99■■□□□ 1.27
NME3-207ENST00000564628 LRP2BPQ9P2M1 347 aa22.99■■□□□ 1.27
NME3-207ENST00000564628 PI4KBQ9UBF8 816 aa22.99■■□□□ 1.27
NME3-207ENST00000564628 TAOK2Q9UL54 1235 aa22.99■■□□□ 1.27
NME3-207ENST00000564628 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
NME3-207ENST00000564628 SMARCA5O60264 1052 aaPredicted RBP22.98■■□□□ 1.27
NME3-207ENST00000564628 HMGCRP04035 888 aa22.98■■□□□ 1.27
NME3-207ENST00000564628 ANKLE1Q8NAG6 615 aa22.98■■□□□ 1.27
NME3-207ENST00000564628 NOL10Q9BSC4 688 aaKnown RBP22.98■■□□□ 1.27
NME3-207ENST00000564628 WDR18Q9BV38 432 aa22.98■■□□□ 1.27
NME3-207ENST00000564628 CDK5RAP2Q96SN8 1893 aa22.97■■□□□ 1.27
NME3-207ENST00000564628 PIH1D3Q9NQM4 214 aaKnown RBP22.97■■□□□ 1.27
NME3-207ENST00000564628 MORF4L1Q9UBU8 362 aa22.97■■□□□ 1.27
NME3-207ENST00000564628 GJD2Q9UKL4 321 aa22.97■■□□□ 1.27
NME3-207ENST00000564628 BAG3O95817 575 aa22.96■■□□□ 1.27
NME3-207ENST00000564628 PLCG2P16885 1265 aa22.96■■□□□ 1.27
NME3-207ENST00000564628 NECAB2Q7Z6G3 386 aa22.96■■□□□ 1.27
NME3-207ENST00000564628 SH3RF3Q8TEJ3 882 aaPredicted RBP22.96■■□□□ 1.27
NME3-207ENST00000564628 PAWRQ96IZ0 340 aaKnown RBP22.96■■□□□ 1.27
NME3-207ENST00000564628 FOCADQ5VW36 1801 aa22.96■■□□□ 1.27
NME3-207ENST00000564628 ASNSP08243 561 aa22.95■■□□□ 1.26
NME3-207ENST00000564628 MYH7P12883 1935 aa22.95■■□□□ 1.26
NME3-207ENST00000564628 PPP4CP60510 307 aa22.95■■□□□ 1.26
NME3-207ENST00000564628 METTL16Q86W50 562 aaKnown RBP22.95■■□□□ 1.26
NME3-207ENST00000564628 RPTORQ8N122 1335 aa22.95■■□□□ 1.26
NME3-207ENST00000564628 NDUFB9Q9Y6M9 179 aa22.95■■□□□ 1.26
NME3-207ENST00000564628 SIPA1L1O43166 1804 aa22.94■■□□□ 1.26
NME3-207ENST00000564628 ATP5JP18859 108 aa22.94■■□□□ 1.26
NME3-207ENST00000564628 HOXA7P31268 230 aaPredicted RBP22.94■■□□□ 1.26
NME3-207ENST00000564628 BACE1P56817 501 aa22.94■■□□□ 1.26
NME3-207ENST00000564628 NAA16Q6N069 864 aaPredicted RBP22.94■■□□□ 1.26
NME3-207ENST00000564628 GINM1Q9NU53 330 aa22.94■■□□□ 1.26
NME3-207ENST00000564628 MTMR2Q13614 643 aa22.93■■□□□ 1.26
NME3-207ENST00000564628 FOXP4Q8IVH2 680 aaPredicted RBP22.93■■□□□ 1.26
NME3-207ENST00000564628 ANTXR1Q9H6X2 564 aa22.93■■□□□ 1.26
NME3-207ENST00000564628 HMX1Q9NP08 348 aaPredicted RBP22.93■■□□□ 1.26
NME3-207ENST00000564628 AATFQ9NY61 560 aaKnown RBP eCLIP22.93■■□□□ 1.26
NME3-207ENST00000564628 TMOD4Q9NZQ9 345 aa22.93■■□□□ 1.26
NME3-207ENST00000564628 C19orf81C9J6K1 198 aa22.92■■□□□ 1.26
NME3-207ENST00000564628 IRX3P78415 501 aaPredicted RBP22.92■■□□□ 1.26
NME3-207ENST00000564628 DIS3LQ8TF46 1054 aaKnown RBP22.92■■□□□ 1.26
NME3-207ENST00000564628 FLT1P17948 1338 aa22.91■■□□□ 1.26
NME3-207ENST00000564628 ALPK3Q96L96 1907 aa22.91■■□□□ 1.26
NME3-207ENST00000564628 NEFLP07196 543 aa22.91■■□□□ 1.26
NME3-207ENST00000564628 TMED8Q6PL24 325 aaPredicted RBP22.91■■□□□ 1.26
NME3-207ENST00000564628 DNAJC18Q9H819 358 aa22.91■■□□□ 1.26
NME3-207ENST00000564628 PLXNB2O15031 1838 aa22.91■■□□□ 1.26
NME3-207ENST00000564628 XRCC5P13010 732 aaKnown RBP22.9■■□□□ 1.26
NME3-207ENST00000564628 ADGRA1Q86SQ6 560 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 MAPKAPK5Q8IW41 473 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 GPRC5AQ8NFJ5 357 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 TGFBRAP1Q8WUH2 860 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 SOCS4Q8WXH5 440 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 P2RX7Q99572 595 aaKnown RBP22.9■■□□□ 1.26
NME3-207ENST00000564628 HAUS7Q99871 368 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 NBPF3Q9H094 633 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 BCL11AQ9H165 835 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 STAP2Q9UGK3 403 aa22.9■■□□□ 1.26
NME3-207ENST00000564628 USP17L10C9JJH3 530 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 BMP8BP34820 402 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 HERVK_113P62684 666 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 JAG1P78504 1218 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 TRIM32Q13049 653 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 TTF1Q15361 905 aaPredicted RBP22.89■■□□□ 1.25
NME3-207ENST00000564628 MAP3K21Q5TCX8 1036 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 CRACR2BQ8N4Y2 399 aaPredicted RBP22.89■■□□□ 1.25
NME3-207ENST00000564628 TRIB2Q92519 343 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 TRIM34Q9BYJ4 488 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 ECHDC1Q9NTX5 307 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 OGDHLQ9ULD0 1010 aa22.89■■□□□ 1.25
NME3-207ENST00000564628 IDH1O75874 414 aaKnown RBP22.88■■□□□ 1.25
NME3-207ENST00000564628 MNX1P50219 401 aaPredicted RBP22.88■■□□□ 1.25
NME3-207ENST00000564628 SMC5Q8IY18 1101 aa22.88■■□□□ 1.25
NME3-207ENST00000564628 TRMT44Q8IYL2 757 aaKnown RBP22.88■■□□□ 1.25
NME3-207ENST00000564628 GTF3C2Q8WUA4 911 aaPredicted RBP22.88■■□□□ 1.25
NME3-207ENST00000564628 GDF15Q99988 308 aa22.88■■□□□ 1.25
NME3-207ENST00000564628 NUDT12Q9BQG2 462 aa22.88■■□□□ 1.25
NME3-207ENST00000564628 BOLA2Q9H3K6 86 aa22.88■■□□□ 1.25
NME3-207ENST00000564628 ZBTB21Q9ULJ3 1066 aa22.88■■□□□ 1.25
NME3-207ENST00000564628 SALL3Q9BXA9 1300 aa22.87■■□□□ 1.25
NME3-207ENST00000564628 GOLIM4O00461 696 aa22.87■■□□□ 1.25
NME3-207ENST00000564628 CYP2B6P20813 491 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms