RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CDC42EP5Q6NZY7 148 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 RSBN1LQ6PCB5 846 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 KIAA0825Q8IV33 1275 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 C8orf76Q96K31 380 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 MAP3K14Q99558 947 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 MXD3Q9BW11 206 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 DHX36Q9H2U1 1008 aaKnown RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 SAP30BPQ9UHR5 308 aaKnown RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 ZNRF3Q9ULT6 936 aa18.12■□□□□ 0.49
COMMD4-210ENST00000564587 DDX49Q9Y6V7 483 aaKnown RBP18.12■□□□□ 0.49
COMMD4-210ENST00000564587 VIL1P09327 827 aaKnown RBP18.11■□□□□ 0.49
COMMD4-210ENST00000564587 CDK8P49336 464 aa18.11■□□□□ 0.49
COMMD4-210ENST00000564587 PLCD1P51178 756 aa18.11■□□□□ 0.49
COMMD4-210ENST00000564587 NTRK3Q16288 839 aa18.11■□□□□ 0.49
COMMD4-210ENST00000564587 PPP4R3BQ5MIZ7 849 aa18.11■□□□□ 0.49
COMMD4-210ENST00000564587 IDI2Q9BXS1 227 aa18.11■□□□□ 0.49
COMMD4-210ENST00000564587 SCAND2PQ9GZW5 306 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-210ENST00000564587 TAOK3Q9H2K8 898 aa18.11■□□□□ 0.49
COMMD4-210ENST00000564587 KCNQ5Q9NR82 932 aa18.11■□□□□ 0.49
COMMD4-210ENST00000564587 FAM217BQ9NTX9 383 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-210ENST00000564587 ECM29Q5VYK3 1845 aa18.11■□□□□ 0.49
COMMD4-210ENST00000564587 BRCA1P38398 1863 aaKnown RBP18.11■□□□□ 0.49
COMMD4-210ENST00000564587 YDJCA8MPS7 323 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 SMIM22K7EJ46 135 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 FMNL1O95466 1100 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-210ENST00000564587 CDC27P30260 824 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 KIF5BP33176 963 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 RBM5P52756 815 aaKnown RBP eCLIP18.1■□□□□ 0.49
COMMD4-210ENST00000564587 RESTQ13127 1097 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 GSE1Q14687 1217 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 AGBL3Q8NEM8 1001 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 FBXO18Q8NFZ0 1043 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 NEDD1Q8NHV4 660 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 NUP133Q8WUM0 1156 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 DYNLL2Q96FJ2 89 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 OSBPL5Q9H0X9 879 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-210ENST00000564587 EHD4Q9H223 541 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 CFAP45Q9UL16 551 aa18.1■□□□□ 0.49
COMMD4-210ENST00000564587 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
COMMD4-210ENST00000564587 RASA1P20936 1047 aa18.09■□□□□ 0.49
COMMD4-210ENST00000564587 TRIM29Q14134 588 aa18.09■□□□□ 0.49
COMMD4-210ENST00000564587 FAM47AQ5JRC9 791 aa18.09■□□□□ 0.49
COMMD4-210ENST00000564587 OGFOD1Q8N543 542 aa18.09■□□□□ 0.49
COMMD4-210ENST00000564587 CTCFLQ8NI51 663 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-210ENST00000564587 JDP2Q8WYK2 163 aa18.09■□□□□ 0.49
COMMD4-210ENST00000564587 ZNF396Q96N95 335 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-210ENST00000564587 RNF26Q9BY78 433 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-210ENST00000564587 KAT14Q9H8E8 782 aa18.09■□□□□ 0.49
COMMD4-210ENST00000564587 ZNF277Q9NRM2 450 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-210ENST00000564587 TCHHQ07283 1943 aa18.08■□□□□ 0.49
COMMD4-210ENST00000564587 FER1L6Q2WGJ9 1857 aa18.08■□□□□ 0.49
COMMD4-210ENST00000564587 ELP1O95163 1332 aa18.08■□□□□ 0.49
COMMD4-210ENST00000564587 DEXIO95424 95 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 GNAQP50148 359 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 AKAP17AQ02040 695 aaKnown RBP18.08■□□□□ 0.48
COMMD4-210ENST00000564587 TROAPQ12815 778 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 PICALMQ13492 652 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 BRAPQ7Z569 592 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 USP48Q86UV5 1035 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 RAB11FIP4Q86YS3 637 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 ALG1Q9BT22 464 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 MYL10Q9BUA6 226 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 TMOD2Q9NZR1 351 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 RBM27Q9P2N5 1060 aaKnown RBP18.08■□□□□ 0.48
COMMD4-210ENST00000564587 SERPINB13Q9UIV8 391 aa18.08■□□□□ 0.48
COMMD4-210ENST00000564587 ENTPD3O75355 529 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 RXRAP19793 462 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 PTGER2P43116 358 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 DNM1Q05193 864 aaKnown RBP18.07■□□□□ 0.48
COMMD4-210ENST00000564587 GABPAQ06546 454 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 FERMT3Q86UX7 667 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 CCDC144CPQ8IYA2 1237 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 CRACR2BQ8N4Y2 399 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-210ENST00000564587 CCDC17Q96LX7 622 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 GMLQ99445 158 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 SLC26A6Q9BXS9 759 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 CNPY2Q9Y2B0 182 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 UTRNP46939 3433 aa18.07■□□□□ 0.48
COMMD4-210ENST00000564587 COL2A1P02458 1487 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-210ENST00000564587 PLIN4Q96Q06 1357 aa18.06■□□□□ 0.48
COMMD4-210ENST00000564587 PSMD14O00487 310 aa18.06■□□□□ 0.48
COMMD4-210ENST00000564587 XBP1P17861 261 aa18.06■□□□□ 0.48
COMMD4-210ENST00000564587 UBE2HP62256 183 aa18.06■□□□□ 0.48
COMMD4-210ENST00000564587 EVX2Q03828 476 aa18.06■□□□□ 0.48
COMMD4-210ENST00000564587 TNIP1Q15025 636 aa18.06■□□□□ 0.48
COMMD4-210ENST00000564587 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
COMMD4-210ENST00000564587 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
COMMD4-210ENST00000564587 FOXP4Q8IVH2 680 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-210ENST00000564587 SYAP1Q96A49 352 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-210ENST00000564587 DDX4Q9NQI0 724 aaKnown RBP18.06■□□□□ 0.48
COMMD4-210ENST00000564587 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
COMMD4-210ENST00000564587 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
COMMD4-210ENST00000564587 DTNBO60941 627 aa18.05■□□□□ 0.48
COMMD4-210ENST00000564587 SLC4A8Q2Y0W8 1093 aa18.05■□□□□ 0.48
COMMD4-210ENST00000564587 FOXD4L6Q3SYB3 417 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-210ENST00000564587 CIAPIN1Q6FI81 312 aa18.05■□□□□ 0.48
COMMD4-210ENST00000564587 FOXD4L3Q6VB84 417 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-210ENST00000564587 MTMR14Q8NCE2 650 aa18.05■□□□□ 0.48
COMMD4-210ENST00000564587 LZTS2Q9BRK4 669 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms