RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
CNOT1-206ENST00000564557 DCP1AQ9NPI6 582 aaPredicted RBP16.43■□□□□ 0.22
CNOT1-206ENST00000564557 DOCK1Q14185 1865 aa16.43■□□□□ 0.22
CNOT1-206ENST00000564557 LAMB1P07942 1786 aa16.42■□□□□ 0.22
CNOT1-206ENST00000564557 A0A0G2JLL6 359 aaPredicted RBP16.42■□□□□ 0.22
CNOT1-206ENST00000564557 GDF11O95390 407 aa16.42■□□□□ 0.22
CNOT1-206ENST00000564557 SPP2Q13103 211 aa16.42■□□□□ 0.22
CNOT1-206ENST00000564557 PKN2Q16513 984 aaKnown RBP16.42■□□□□ 0.22
CNOT1-206ENST00000564557 CERKLQ49MI3 558 aaPredicted RBP16.42■□□□□ 0.22
CNOT1-206ENST00000564557 PRRT2Q7Z6L0 340 aaPredicted RBP16.42■□□□□ 0.22
CNOT1-206ENST00000564557 CCDC84Q86UT8 332 aaPredicted RBP16.42■□□□□ 0.22
CNOT1-206ENST00000564557 METTL16Q86W50 562 aaKnown RBP16.42■□□□□ 0.22
CNOT1-206ENST00000564557 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
CNOT1-206ENST00000564557 PI4K2BQ8TCG2 481 aa16.42■□□□□ 0.22
CNOT1-206ENST00000564557 APPBP2Q92624 585 aa16.42■□□□□ 0.22
CNOT1-206ENST00000564557 ABHD8Q96I13 439 aa16.42■□□□□ 0.22
CNOT1-206ENST00000564557 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
CNOT1-206ENST00000564557 MYH7P12883 1935 aa16.42■□□□□ 0.22
CNOT1-206ENST00000564557 PRKAB2O43741 272 aa16.41■□□□□ 0.22
CNOT1-206ENST00000564557 IGHDP01880 384 aa16.41■□□□□ 0.22
CNOT1-206ENST00000564557 PLCD1P51178 756 aa16.41■□□□□ 0.22
CNOT1-206ENST00000564557 PDE1AP54750 535 aa16.41■□□□□ 0.22
CNOT1-206ENST00000564557 KIF22Q14807 665 aa16.41■□□□□ 0.22
CNOT1-206ENST00000564557 CHD1LQ86WJ1 897 aa16.41■□□□□ 0.22
CNOT1-206ENST00000564557 PARK7Q99497 189 aaKnown RBP16.41■□□□□ 0.22
CNOT1-206ENST00000564557 DNAJC18Q9H819 358 aa16.41■□□□□ 0.22
CNOT1-206ENST00000564557 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.41■□□□□ 0.22
CNOT1-206ENST00000564557 TLR2O60603 784 aa16.4■□□□□ 0.22
CNOT1-206ENST00000564557 CHGBP05060 677 aa16.4■□□□□ 0.22
CNOT1-206ENST00000564557 APPP05067 770 aa16.4■□□□□ 0.22
CNOT1-206ENST00000564557 PABPC4Q13310 644 aaKnown RBP eCLIP16.4■□□□□ 0.22
CNOT1-206ENST00000564557 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
CNOT1-206ENST00000564557 ABCB5Q2M3G0 1257 aa16.4■□□□□ 0.22
CNOT1-206ENST00000564557 EVI5LQ96CN4 794 aa16.4■□□□□ 0.22
CNOT1-206ENST00000564557 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
CNOT1-206ENST00000564557 STAP2Q9UGK3 403 aa16.4■□□□□ 0.22
CNOT1-206ENST00000564557 ZBTB21Q9ULJ3 1066 aa16.4■□□□□ 0.22
CNOT1-206ENST00000564557 CCDC85CA6NKD9 419 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 MPHOSPH10O00566 681 aaKnown RBP16.39■□□□□ 0.21
CNOT1-206ENST00000564557 GH2P01242 217 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 GNAT2P19087 354 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 TATDN1Q6P1N9 297 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 CD99L2Q8TCZ2 262 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 SMCR8Q8TEV9 937 aaPredicted RBP16.39■□□□□ 0.21
CNOT1-206ENST00000564557 SWAP70Q9UH65 585 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 PNMA3Q9UL41 463 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 TRIM17Q9Y577 477 aa16.39■□□□□ 0.21
CNOT1-206ENST00000564557 NAV1Q8NEY1 1877 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 USP17L10C9JJH3 530 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 USP17L21D6R901 530 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 GPAA1O43292 621 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 HMGCS2P54868 508 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 NUCB1Q02818 461 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
CNOT1-206ENST00000564557 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
CNOT1-206ENST00000564557 FEZ1Q99689 392 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 EFCC1Q9HA90 598 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 SLC45A1Q9Y2W3 748 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 ATAD5Q96QE3 1844 aa16.38■□□□□ 0.21
CNOT1-206ENST00000564557 CYP2D6P10635 497 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 OSBPP22059 807 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 BACE1P56817 501 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 MTMR2Q13614 643 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 MOGSQ13724 837 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 GPAT2Q6NUI2 795 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 ARPP21Q9UBL0 812 aaPredicted RBP16.37■□□□□ 0.21
CNOT1-206ENST00000564557 CPA4Q9UI42 421 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 AGTPBP1Q9UPW5 1226 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 SALL3Q9BXA9 1300 aa16.37■□□□□ 0.21
CNOT1-206ENST00000564557 SIPA1L1O43166 1804 aa16.36■□□□□ 0.21
CNOT1-206ENST00000564557 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
CNOT1-206ENST00000564557 CYP2C8P10632 490 aa16.36■□□□□ 0.21
CNOT1-206ENST00000564557 SHMT1P34896 483 aa16.36■□□□□ 0.21
CNOT1-206ENST00000564557 TDO2P48775 406 aa16.36■□□□□ 0.21
CNOT1-206ENST00000564557 C12orf60Q5U649 245 aa16.36■□□□□ 0.21
CNOT1-206ENST00000564557 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
CNOT1-206ENST00000564557 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
CNOT1-206ENST00000564557 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
CNOT1-206ENST00000564557 PATL2C9JE40 543 aaKnown RBP16.35■□□□□ 0.21
CNOT1-206ENST00000564557 M0R2C6 588 aa16.35■□□□□ 0.21
CNOT1-206ENST00000564557 USP14P54578 494 aa16.35■□□□□ 0.21
CNOT1-206ENST00000564557 GABPAQ06546 454 aa16.35■□□□□ 0.21
CNOT1-206ENST00000564557 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
CNOT1-206ENST00000564557 USP17L2Q6R6M4 530 aa16.35■□□□□ 0.21
CNOT1-206ENST00000564557 OTOP1Q7RTM1 612 aa16.35■□□□□ 0.21
CNOT1-206ENST00000564557 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
CNOT1-206ENST00000564557 CYP2D7A0A087X1C5 515 aa16.34■□□□□ 0.21
CNOT1-206ENST00000564557 ECM2O94769 699 aaPredicted RBP16.34■□□□□ 0.21
CNOT1-206ENST00000564557 IRX3P78415 501 aaPredicted RBP16.34■□□□□ 0.21
CNOT1-206ENST00000564557 JAG1P78504 1218 aa16.34■□□□□ 0.21
CNOT1-206ENST00000564557 SHROOM1Q2M3G4 852 aaPredicted RBP16.34■□□□□ 0.21
CNOT1-206ENST00000564557 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms