RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 DNAJC18Q9H819 358 aa18.23■□□□□ 0.51
SPG7-210ENST00000564409 IL1RAPL2Q9NP60 686 aa18.23■□□□□ 0.51
SPG7-210ENST00000564409 TMOD4Q9NZQ9 345 aa18.23■□□□□ 0.51
SPG7-210ENST00000564409 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
SPG7-210ENST00000564409 ANKRD13CQ8N6S4 541 aa18.22■□□□□ 0.51
SPG7-210ENST00000564409 MIGA1Q8NAN2 632 aa18.22■□□□□ 0.51
SPG7-210ENST00000564409 ANTXR1Q9H6X2 564 aa18.22■□□□□ 0.51
SPG7-210ENST00000564409 SERPINB13Q9UIV8 391 aa18.22■□□□□ 0.51
SPG7-210ENST00000564409 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
SPG7-210ENST00000564409 USP17L10C9JJH3 530 aa18.21■□□□□ 0.51
SPG7-210ENST00000564409 GJB1P08034 283 aa18.21■□□□□ 0.51
SPG7-210ENST00000564409 SIRT2Q8IXJ6 389 aa18.21■□□□□ 0.51
SPG7-210ENST00000564409 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
SPG7-210ENST00000564409 BIN2Q9UBW5 565 aaPredicted RBP18.21■□□□□ 0.51
SPG7-210ENST00000564409 SAP30BPQ9UHR5 308 aaKnown RBP18.21■□□□□ 0.51
SPG7-210ENST00000564409 ZBTB21Q9ULJ3 1066 aa18.21■□□□□ 0.51
SPG7-210ENST00000564409 ADCY3O60266 1144 aa18.2■□□□□ 0.5
SPG7-210ENST00000564409 ECM2O94769 699 aaPredicted RBP18.2■□□□□ 0.5
SPG7-210ENST00000564409 FLT3LGP49771 235 aa18.2■□□□□ 0.5
SPG7-210ENST00000564409 MTMR2Q13614 643 aa18.2■□□□□ 0.5
SPG7-210ENST00000564409 SLC9C2Q5TAH2 1124 aa18.2■□□□□ 0.5
SPG7-210ENST00000564409 TATDN1Q6P1N9 297 aa18.2■□□□□ 0.5
SPG7-210ENST00000564409 GTF3C2Q8WUA4 911 aaPredicted RBP18.2■□□□□ 0.5
SPG7-210ENST00000564409 RIOK1Q9BRS2 568 aaKnown RBP18.2■□□□□ 0.5
SPG7-210ENST00000564409 NDUFB9Q9Y6M9 179 aa18.2■□□□□ 0.5
SPG7-210ENST00000564409 MAGEB6P1A0A0J9YX57 407 aa18.19■□□□□ 0.5
SPG7-210ENST00000564409 CCL5P13501 91 aa18.19■□□□□ 0.5
SPG7-210ENST00000564409 PDE6AP16499 860 aa18.19■□□□□ 0.5
SPG7-210ENST00000564409 GJA8P48165 433 aa18.19■□□□□ 0.5
SPG7-210ENST00000564409 IRX3P78415 501 aaPredicted RBP18.19■□□□□ 0.5
SPG7-210ENST00000564409 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
SPG7-210ENST00000564409 MORF4L1Q9UBU8 362 aa18.19■□□□□ 0.5
SPG7-210ENST00000564409 GABRQQ9UN88 632 aa18.19■□□□□ 0.5
SPG7-210ENST00000564409 APBB1O00213 710 aa18.18■□□□□ 0.5
SPG7-210ENST00000564409 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
SPG7-210ENST00000564409 MTFR1Q15390 333 aa18.18■□□□□ 0.5
SPG7-210ENST00000564409 USP17L2Q6R6M4 530 aa18.18■□□□□ 0.5
SPG7-210ENST00000564409 RNF208Q9H0X6 261 aa18.18■□□□□ 0.5
SPG7-210ENST00000564409 GOLIM4O00461 696 aa18.17■□□□□ 0.5
SPG7-210ENST00000564409 GDF11O95390 407 aa18.17■□□□□ 0.5
SPG7-210ENST00000564409 ATP5JP18859 108 aa18.17■□□□□ 0.5
SPG7-210ENST00000564409 USP14P54578 494 aa18.17■□□□□ 0.5
SPG7-210ENST00000564409 JAG1P78504 1218 aa18.17■□□□□ 0.5
SPG7-210ENST00000564409 CERKLQ49MI3 558 aaPredicted RBP18.17■□□□□ 0.5
SPG7-210ENST00000564409 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■■□□□ 12.7
SPG7-210ENST00000564409 NAV1Q8NEY1 1877 aa18.17■□□□□ 0.5
SPG7-210ENST00000564409 DDX60LQ5H9U9 1706 aaKnown RBP18.17■□□□□ 0.5
SPG7-210ENST00000564409 MYH7P12883 1935 aa18.16■□□□□ 0.5
SPG7-210ENST00000564409 GH2P01242 217 aa18.16■□□□□ 0.5
SPG7-210ENST00000564409 C12orf42Q96LP6 360 aa18.16■□□□□ 0.5
SPG7-210ENST00000564409 DNAJC2Q99543 621 aaKnown RBP18.16■□□□□ 0.5
SPG7-210ENST00000564409 LRRCC1Q9C099 1032 aa18.16■□□□□ 0.5
SPG7-210ENST00000564409 CABP5Q9NP86 173 aa18.16■□□□□ 0.5
SPG7-210ENST00000564409 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
SPG7-210ENST00000564409 TCRBV5S4A2TA0A5A2 114 aa18.15■□□□□ 0.5
SPG7-210ENST00000564409 POLR3DP05423 398 aaPredicted RBP18.15■□□□□ 0.5
SPG7-210ENST00000564409 HERVK_113P62684 666 aa18.15■□□□□ 0.5
SPG7-210ENST00000564409 ABCB5Q2M3G0 1257 aa18.15■□□□□ 0.5
SPG7-210ENST00000564409 GPRC5AQ8NFJ5 357 aa18.15■□□□□ 0.5
SPG7-210ENST00000564409 PAG1Q9NWQ8 432 aa18.15■□□□□ 0.5
SPG7-210ENST00000564409 MKI67P46013 3256 aaKnown RBP18.15■□□□□ 0.5
SPG7-210ENST00000564409 INHAP05111 366 aa18.14■□□□□ 0.49
SPG7-210ENST00000564409 SHISA4Q96DD7 197 aa18.14■□□□□ 0.49
SPG7-210ENST00000564409 P2RX7Q99572 595 aaKnown RBP18.14■□□□□ 0.49
SPG7-210ENST00000564409 HAUS7Q99871 368 aa18.14■□□□□ 0.49
SPG7-210ENST00000564409 KIAA1683Q9H0B3 1180 aa18.14■□□□□ 0.49
SPG7-210ENST00000564409 EMILIN3Q9NT22 766 aa18.14■□□□□ 0.49
SPG7-210ENST00000564409 PCDH10Q9P2E7 1040 aa18.14■□□□□ 0.49
SPG7-210ENST00000564409 MYH8P13535 1937 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 SGPL1O95470 568 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 ELNP15502 786 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 MAPK4P31152 587 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 PLCD1P51178 756 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 GABPAQ06546 454 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 U2AF1L4Q8WU68 220 aaKnown RBP18.13■□□□□ 0.49
SPG7-210ENST00000564409 FEZ1Q99689 392 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 UNC93B1Q9H1C4 597 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 ATP8A2Q9NTI2 1148 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 GJD2Q9UKL4 321 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 BRCA2P51587 3418 aa18.13■□□□□ 0.49
SPG7-210ENST00000564409 USP17L15C9J2P7 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 USP17L13C9JLJ4 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 USP17L11C9JVI0 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 USP17L18D6R9N7 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 USP17L22D6RA61 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 USP17L17D6RBQ6 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 USP17L19D6RCP7 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 USP17L20D6RJB6 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 HMGCRP04035 888 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 SHMT1P34896 483 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 ADD2P35612 726 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 USP17L24Q0WX57 530 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 RAB3GAP1Q15042 981 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 SHROOM1Q2M3G4 852 aaPredicted RBP18.12■□□□□ 0.49
SPG7-210ENST00000564409 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 UBE2Q1Q7Z7E8 422 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 TRMT44Q8IYL2 757 aaKnown RBP18.12■□□□□ 0.49
SPG7-210ENST00000564409 SOCS4Q8WXH5 440 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 HTATIP2Q9BUP3 242 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms