RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 CCDC17Q96LX7 622 aa15.07■□□□□ 0
CLK3-214ENST00000564096 IPO9Q96P70 1041 aaKnown RBP15.07■□□□□ 0
CLK3-214ENST00000564096 TBC1D2Q9BYX2 928 aa15.07■□□□□ 0
CLK3-214ENST00000564096 DEFB129Q9H1M3 183 aa15.07■□□□□ 0
CLK3-214ENST00000564096 TAF1DQ9H5J8 278 aaPredicted RBP15.07■□□□□ 0
CLK3-214ENST00000564096 LIMCH1Q9UPQ0 1083 aa15.07■□□□□ 0
CLK3-214ENST00000564096 TNKSO95271 1327 aa15.07■□□□□ 0
CLK3-214ENST00000564096 TBC1D12O60347 775 aa15.06■□□□□ 0
CLK3-214ENST00000564096 TFAP4Q01664 338 aa15.06■□□□□ 0
CLK3-214ENST00000564096 EVX2Q03828 476 aa15.06■□□□□ 0
CLK3-214ENST00000564096 WTAPQ15007 396 aa15.06■□□□□ 0
CLK3-214ENST00000564096 NFXL1Q6ZNB6 911 aa15.06■□□□□ 0
CLK3-214ENST00000564096 CYB5R4Q7L1T6 521 aa15.06■□□□□ 0
CLK3-214ENST00000564096 CHST3Q7LGC8 479 aa15.06■□□□□ 0
CLK3-214ENST00000564096 METTL16Q86W50 562 aaKnown RBP15.06■□□□□ 0
CLK3-214ENST00000564096 TMTC2Q8N394 836 aa15.06■□□□□ 0
CLK3-214ENST00000564096 ZSCAN10Q96SZ4 725 aaPredicted RBP15.06■□□□□ 0
CLK3-214ENST00000564096 LRRC2Q9BYS8 371 aa15.06■□□□□ 0
CLK3-214ENST00000564096 AGXT2Q9BYV1 514 aa15.06■□□□□ 0
CLK3-214ENST00000564096 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.06■□□□□ 0
CLK3-214ENST00000564096 ZSWIM5Q9P217 1185 aa15.06■□□□□ 0
CLK3-214ENST00000564096 ASTN2O75129 1339 aaPredicted RBP15.06■□□□□ 0
CLK3-214ENST00000564096 CCDC69A6NI79 296 aa15.05■□□□□ -0
CLK3-214ENST00000564096 SMIM22K7EJ46 135 aa15.05■□□□□ -0
CLK3-214ENST00000564096 SHMT1P34896 483 aa15.05■□□□□ -0
CLK3-214ENST00000564096 LIFRP42702 1097 aa15.05■□□□□ -0
CLK3-214ENST00000564096 HIRAP54198 1017 aaPredicted RBP15.05■□□□□ -0
CLK3-214ENST00000564096 TOB2Q14106 344 aaPredicted RBP15.05■□□□□ -0
CLK3-214ENST00000564096 EAPPQ56P03 285 aaPredicted RBP15.05■□□□□ -0
CLK3-214ENST00000564096 IFIT1BQ5T764 474 aaKnown RBP15.05■□□□□ -0
CLK3-214ENST00000564096 SYNE3Q6ZMZ3 975 aa15.05■□□□□ -0
CLK3-214ENST00000564096 INCENPQ9NQS7 918 aa15.05■□□□□ -0
CLK3-214ENST00000564096 TACC3Q9Y6A5 838 aa15.05■□□□□ -0
CLK3-214ENST00000564096 GOLGA8BA8MQT2 603 aa15.04■□□□□ -0
CLK3-214ENST00000564096 MPHOSPH10O00566 681 aaKnown RBP15.04■□□□□ -0
CLK3-214ENST00000564096 CD2BP2O95400 341 aaKnown RBP15.04■□□□□ -0
CLK3-214ENST00000564096 VEGFAP15692 232 aaPredicted RBP15.04■□□□□ -0
CLK3-214ENST00000564096 SUPT20HL1Q3ZLR7 823 aa15.04■□□□□ -0
CLK3-214ENST00000564096 CERKLQ49MI3 558 aaPredicted RBP15.04■□□□□ -0
CLK3-214ENST00000564096 FAM47AQ5JRC9 791 aa15.04■□□□□ -0
CLK3-214ENST00000564096 TATDN1Q6P1N9 297 aa15.04■□□□□ -0
CLK3-214ENST00000564096 SGMS1Q86VZ5 419 aa15.04■□□□□ -0
CLK3-214ENST00000564096 NEDD1Q8NHV4 660 aa15.04■□□□□ -0
CLK3-214ENST00000564096 DNAJC18Q9H819 358 aa15.04■□□□□ -0
CLK3-214ENST00000564096 CABP5Q9NP86 173 aa15.04■□□□□ -0
CLK3-214ENST00000564096 TCP11L1Q9NUJ3 509 aa15.04■□□□□ -0
CLK3-214ENST00000564096 NAP1L2Q9ULW6 460 aaPredicted RBP15.04■□□□□ -0
CLK3-214ENST00000564096 SIPA1L1O43166 1804 aa15.03■□□□□ -0
CLK3-214ENST00000564096 KLF18A0A0U1RQI7 1052 aa15.03■□□□□ -0
CLK3-214ENST00000564096 NF2P35240 595 aa15.03■□□□□ -0
CLK3-214ENST00000564096 RCAN1P53805 252 aa15.03■□□□□ -0
CLK3-214ENST00000564096 IFFO2Q5TF58 517 aa15.03■□□□□ -0
CLK3-214ENST00000564096 TMEM179Q6ZVK1 233 aa15.03■□□□□ -0
CLK3-214ENST00000564096 KRT26Q7Z3Y9 468 aa15.03■□□□□ -0
CLK3-214ENST00000564096 DGKHQ86XP1 1220 aa15.03■□□□□ -0
CLK3-214ENST00000564096 ZKSCAN3Q9BRR0 538 aa15.03■□□□□ -0
CLK3-214ENST00000564096 LY9Q9HBG7 655 aa15.03■□□□□ -0
CLK3-214ENST00000564096 SLC12A7Q9Y666 1083 aa15.03■□□□□ -0
CLK3-214ENST00000564096 CALM1P0DP23 149 aa15.02■□□□□ -0
CLK3-214ENST00000564096 CALM2P0DP24 149 aa15.02■□□□□ -0
CLK3-214ENST00000564096 CALM3P0DP25 149 aa15.02■□□□□ -0
CLK3-214ENST00000564096 AKR1B1P15121 316 aa15.02■□□□□ -0
CLK3-214ENST00000564096 ABCB5Q2M3G0 1257 aa15.02■□□□□ -0
CLK3-214ENST00000564096 CATIPQ7Z7H3 387 aa15.02■□□□□ -0
CLK3-214ENST00000564096 ENAHQ8N8S7 591 aaPredicted RBP15.02■□□□□ -0
CLK3-214ENST00000564096 IGDCC4Q8TDY8 1250 aa15.02■□□□□ -0
CLK3-214ENST00000564096 ZNF274Q96GC6 653 aaPredicted RBP15.02■□□□□ -0
CLK3-214ENST00000564096 TMX3Q96JJ7 454 aa15.02■□□□□ -0
CLK3-214ENST00000564096 TEPSINQ96N21 525 aa15.02■□□□□ -0
CLK3-214ENST00000564096 ZNF341Q9BYN7 854 aa15.02■□□□□ -0
CLK3-214ENST00000564096 SLKQ9H2G2 1235 aaPredicted RBP15.02■□□□□ -0
CLK3-214ENST00000564096 KAT14Q9H8E8 782 aa15.02■□□□□ -0
CLK3-214ENST00000564096 GINM1Q9NU53 330 aa15.02■□□□□ -0
CLK3-214ENST00000564096 TPCN1Q9ULQ1 816 aa15.02■□□□□ -0
CLK3-214ENST00000564096 STX8Q9UNK0 236 aa15.02■□□□□ -0
CLK3-214ENST00000564096 FAM196BA6NMK8 535 aa15.01□□□□□ -0.01
CLK3-214ENST00000564096 DHX16O60231 1041 aaKnown RBP15.01□□□□□ -0.01
CLK3-214ENST00000564096 DDAH1O94760 285 aa15.01□□□□□ -0.01
CLK3-214ENST00000564096 EVCP57679 992 aa15.01□□□□□ -0.01
CLK3-214ENST00000564096 APOBRQ0VD83 1088 aa15.01□□□□□ -0.01
CLK3-214ENST00000564096 COL9A3Q14050 684 aaPredicted RBP15.01□□□□□ -0.01
CLK3-214ENST00000564096 SEC23AQ15436 765 aa15.01□□□□□ -0.01
CLK3-214ENST00000564096 PGAP2Q9UHJ9 254 aa15.01□□□□□ -0.01
CLK3-214ENST00000564096 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
CLK3-214ENST00000564096 MYH8P13535 1937 aa15.01□□□□□ -0.01
CLK3-214ENST00000564096 ADM5C9JUS6 153 aa15□□□□□ -0.01
CLK3-214ENST00000564096 ZBTB43O43298 467 aa15□□□□□ -0.01
CLK3-214ENST00000564096 TTLL1O95922 423 aa15□□□□□ -0.01
CLK3-214ENST00000564096 METAP2P50579 478 aaKnown RBP eCLIP15□□□□□ -0.01
CLK3-214ENST00000564096 MAP3K10Q02779 954 aa15□□□□□ -0.01
CLK3-214ENST00000564096 ICA1Q05084 483 aa15□□□□□ -0.01
CLK3-214ENST00000564096 CPLX2Q6PUV4 134 aaKnown RBP15□□□□□ -0.01
CLK3-214ENST00000564096 APOA5Q6Q788 366 aa15□□□□□ -0.01
CLK3-214ENST00000564096 CDC37L1Q7L3B6 337 aa15□□□□□ -0.01
CLK3-214ENST00000564096 LDHDQ86WU2 507 aa15□□□□□ -0.01
CLK3-214ENST00000564096 MICU3Q86XE3 530 aa15□□□□□ -0.01
CLK3-214ENST00000564096 CDAN1Q8IWY9 1227 aa15□□□□□ -0.01
CLK3-214ENST00000564096 GTF3C6Q969F1 213 aa15□□□□□ -0.01
CLK3-214ENST00000564096 KANSL2Q9H9L4 492 aa15□□□□□ -0.01
CLK3-214ENST00000564096 SCAF8Q9UPN6 1271 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms