RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 VEZTQ9HBM0 779 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 SWAP70Q9UH65 585 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 TCP10L2B9ZVM9 353 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 ZBTB43O43298 467 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 SEC23AQ15436 765 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 EHD4Q9H223 541 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 HPS5Q9UPZ3 1129 aa25.72■■□□□ 1.71
LINC01960-201ENST00000563759 WNT10BO00744 389 aa25.71■■□□□ 1.71
LINC01960-201ENST00000563759 NMT2O60551 498 aa25.71■■□□□ 1.71
LINC01960-201ENST00000563759 METAP2P50579 478 aaKnown RBP eCLIP25.71■■□□□ 1.71
LINC01960-201ENST00000563759 NUCB2P80303 420 aa25.71■■□□□ 1.71
LINC01960-201ENST00000563759 GABPAQ06546 454 aa25.71■■□□□ 1.71
LINC01960-201ENST00000563759 CNOT7Q9UIV1 285 aaKnown RBP25.71■■□□□ 1.71
LINC01960-201ENST00000563759 DDTLA6NHG4 134 aaPredicted RBP25.7■■□□□ 1.71
LINC01960-201ENST00000563759 DHX16O60231 1041 aaKnown RBP25.7■■□□□ 1.71
LINC01960-201ENST00000563759 DTNBO60941 627 aa25.7■■□□□ 1.71
LINC01960-201ENST00000563759 GPC2Q8N158 579 aa25.7■■□□□ 1.71
LINC01960-201ENST00000563759 CRACR2BQ8N4Y2 399 aaPredicted RBP25.7■■□□□ 1.71
LINC01960-201ENST00000563759 LLPHQ9BRT6 129 aaKnown RBP25.7■■□□□ 1.71
LINC01960-201ENST00000563759 TRIM34Q9BYJ4 488 aa25.7■■□□□ 1.71
LINC01960-201ENST00000563759 PI4KBQ9UBF8 816 aa25.7■■□□□ 1.71
LINC01960-201ENST00000563759 ATRNL1Q5VV63 1379 aa25.7■■□□□ 1.7
LINC01960-201ENST00000563759 RXRAP19793 462 aa25.7■■□□□ 1.7
LINC01960-201ENST00000563759 GPR162Q16538 588 aa25.7■■□□□ 1.7
LINC01960-201ENST00000563759 NBPF9Q3BBW0 867 aa25.7■■□□□ 1.7
LINC01960-201ENST00000563759 ZBED3Q96IU2 234 aaPredicted RBP25.7■■□□□ 1.7
LINC01960-201ENST00000563759 MYL10Q9BUA6 226 aa25.7■■□□□ 1.7
LINC01960-201ENST00000563759 RBM26Q5T8P6 1007 aaKnown RBP25.69■■□□□ 1.7
LINC01960-201ENST00000563759 MYH6P13533 1939 aa25.69■■□□□ 1.7
LINC01960-201ENST00000563759 GOLGA8AA7E2F4 631 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 CPLX1O14810 134 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 PKP1Q13835 747 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 SH3BP5LQ7L8J4 393 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 ZNF654Q8IZM8 581 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 JAK2O60674 1132 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 RAB3GAP1Q15042 981 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 CCDC178Q5BJE1 867 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 FKBP1CQ5VVH2 108 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 CCDC144CPQ8IYA2 1237 aa25.68■■□□□ 1.7
LINC01960-201ENST00000563759 GREB1LQ9C091 1923 aaPredicted RBP25.67■■□□□ 1.7
LINC01960-201ENST00000563759 MYH4Q9Y623 1939 aa25.67■■□□□ 1.7
LINC01960-201ENST00000563759 EGFRP00533 1210 aa25.67■■□□□ 1.7
LINC01960-201ENST00000563759 NSUN7Q8NE18 718 aaKnown RBP25.67■■□□□ 1.7
LINC01960-201ENST00000563759 CSRNP1Q96S65 589 aa25.67■■□□□ 1.7
LINC01960-201ENST00000563759 PTPDC1A2A3K4 754 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 H7C1D1 291 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 KIF4BQ2VIQ3 1234 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 TBC1D10BQ4KMP7 808 aaPredicted RBP25.66■■□□□ 1.7
LINC01960-201ENST00000563759 C9orf131Q5VYM1 1079 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 SAMD7Q7Z3H4 446 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 CATIPQ7Z7H3 387 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 FAM151AQ8WW52 585 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 NID2Q14112 1375 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 RCAN1P53805 252 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 NUP133Q8WUM0 1156 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 IL17RBQ9NRM6 502 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 TCP11L1Q9NUJ3 509 aa25.66■■□□□ 1.7
LINC01960-201ENST00000563759 CNTNAP1P78357 1384 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 PLIN4Q96Q06 1357 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 CTDNEP1O95476 244 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 SHMT1P34896 483 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 HMGN5P82970 282 aaKnown RBP25.65■■□□□ 1.7
LINC01960-201ENST00000563759 DGKHQ86XP1 1220 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 NEDD1Q8NHV4 660 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 SMARCC2Q8TAQ2 1214 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 DDX11Q96FC9 970 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 GPRC5DQ9NZD1 345 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 TAOK2Q9UL54 1235 aa25.65■■□□□ 1.7
LINC01960-201ENST00000563759 FAM196BA6NMK8 535 aa25.64■■□□□ 1.7
LINC01960-201ENST00000563759 CPLX2Q6PUV4 134 aaKnown RBP25.64■■□□□ 1.7
LINC01960-201ENST00000563759 FAM83AQ86UY5 434 aa25.64■■□□□ 1.7
LINC01960-201ENST00000563759 FAM184AQ8NB25 1140 aa25.64■■□□□ 1.7
LINC01960-201ENST00000563759 DNAJC18Q9H819 358 aa25.64■■□□□ 1.7
LINC01960-201ENST00000563759 STX8Q9UNK0 236 aa25.64■■□□□ 1.7
LINC01960-201ENST00000563759 SOCS7O14512 581 aa25.64■■□□□ 1.69
LINC01960-201ENST00000563759 PDCP20941 246 aa25.64■■□□□ 1.69
LINC01960-201ENST00000563759 TNNI2P48788 182 aa25.64■■□□□ 1.69
LINC01960-201ENST00000563759 RTN1Q16799 776 aa25.64■■□□□ 1.69
LINC01960-201ENST00000563759 FOXP4Q8IVH2 680 aaPredicted RBP25.64■■□□□ 1.69
LINC01960-201ENST00000563759 KAT14Q9H8E8 782 aa25.64■■□□□ 1.69
LINC01960-201ENST00000563759 CDKL5O76039 1030 aa25.63■■□□□ 1.69
LINC01960-201ENST00000563759 SYT1P21579 422 aa25.63■■□□□ 1.69
LINC01960-201ENST00000563759 RCSD1Q6JBY9 416 aa25.63■■□□□ 1.69
LINC01960-201ENST00000563759 KIF3AQ9Y496 699 aa25.63■■□□□ 1.69
LINC01960-201ENST00000563759 WDR33Q9C0J8 1336 aaKnown RBP25.62■■□□□ 1.69
LINC01960-201ENST00000563759 DDAH1O94760 285 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 CALM1P0DP23 149 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 CALM2P0DP24 149 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 CALM3P0DP25 149 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 AKR1B1P15121 316 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 CDC27P30260 824 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 ADD1P35611 737 aaKnown RBP25.62■■□□□ 1.69
LINC01960-201ENST00000563759 TNFAIP1Q13829 316 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 TNPO1Q92973 898 aaKnown RBP25.62■■□□□ 1.69
LINC01960-201ENST00000563759 CCDC196A0A1B0GTZ2 297 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 STX6O43752 255 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 PPFIA3O75145 1194 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 SLURP2P0DP57 97 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 TMEM39BQ9GZU3 492 aa25.62■■□□□ 1.69
LINC01960-201ENST00000563759 MPHOSPH10O00566 681 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms