RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 CLRN2A0PK11 232 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 CCDC69A6NI79 296 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 GOLGA8BA8MQT2 603 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 TFAP4Q01664 338 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 SCRN1Q12765 414 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 FAM47AQ5JRC9 791 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 C9orf131Q5VYM1 1079 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 METTL16Q86W50 562 aaKnown RBP27.68■■■□□ 2.02
ZNF688-204ENST00000563665 ENAHQ8N8S7 591 aaPredicted RBP27.68■■■□□ 2.02
ZNF688-204ENST00000563665 LLPHQ9BRT6 129 aaKnown RBP27.68■■■□□ 2.02
ZNF688-204ENST00000563665 GPRC5DQ9NZD1 345 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 CNTNAP1P78357 1384 aa27.68■■■□□ 2.02
ZNF688-204ENST00000563665 DDTLA6NHG4 134 aaPredicted RBP27.67■■■□□ 2.02
ZNF688-204ENST00000563665 H7C1D1 291 aa27.67■■■□□ 2.02
ZNF688-204ENST00000563665 NBPF9Q3BBW0 867 aa27.67■■■□□ 2.02
ZNF688-204ENST00000563665 NFXL1Q6ZNB6 911 aa27.67■■■□□ 2.02
ZNF688-204ENST00000563665 SENP2Q9HC62 589 aa27.67■■■□□ 2.02
ZNF688-204ENST00000563665 HPS5Q9UPZ3 1129 aa27.67■■■□□ 2.02
ZNF688-204ENST00000563665 SMC3Q9UQE7 1217 aa27.67■■■□□ 2.02
ZNF688-204ENST00000563665 ZC3H4Q9UPT8 1303 aaKnown RBP27.67■■■□□ 2.02
ZNF688-204ENST00000563665 TSPY3P0CV98 308 aa27.67■■■□□ 2.02
ZNF688-204ENST00000563665 TSPY8P0CW00 308 aa27.67■■■□□ 2.02
ZNF688-204ENST00000563665 FOXP4Q8IVH2 680 aaPredicted RBP27.67■■■□□ 2.02
ZNF688-204ENST00000563665 NAP1L2Q9ULW6 460 aaPredicted RBP27.67■■■□□ 2.02
ZNF688-204ENST00000563665 TCP10L2B9ZVM9 353 aa27.66■■■□□ 2.02
ZNF688-204ENST00000563665 KIF4BQ2VIQ3 1234 aa27.66■■■□□ 2.02
ZNF688-204ENST00000563665 ZSCAN29Q8IWY8 852 aaPredicted RBP27.66■■■□□ 2.02
ZNF688-204ENST00000563665 NEDD1Q8NHV4 660 aa27.66■■■□□ 2.02
ZNF688-204ENST00000563665 ANKS1AQ92625 1134 aa27.66■■■□□ 2.02
ZNF688-204ENST00000563665 SLC12A7Q9Y666 1083 aa27.66■■■□□ 2.02
ZNF688-204ENST00000563665 ZBTB43O43298 467 aa27.65■■■□□ 2.02
ZNF688-204ENST00000563665 DHX16O60231 1041 aaKnown RBP27.65■■■□□ 2.02
ZNF688-204ENST00000563665 SHMT1P34896 483 aa27.65■■■□□ 2.02
ZNF688-204ENST00000563665 IFIT1BQ5T764 474 aaKnown RBP27.65■■■□□ 2.02
ZNF688-204ENST00000563665 SYNE3Q6ZMZ3 975 aa27.65■■■□□ 2.02
ZNF688-204ENST00000563665 DGKHQ86XP1 1220 aa27.65■■■□□ 2.02
ZNF688-204ENST00000563665 VEZTQ9HBM0 779 aa27.65■■■□□ 2.02
ZNF688-204ENST00000563665 EGFRP00533 1210 aa27.64■■■□□ 2.02
ZNF688-204ENST00000563665 TNNI2P48788 182 aa27.63■■■□□ 2.01
ZNF688-204ENST00000563665 METAP2P50579 478 aaKnown RBP eCLIP27.63■■■□□ 2.01
ZNF688-204ENST00000563665 CCT2P78371 535 aaKnown RBP27.63■■■□□ 2.01
ZNF688-204ENST00000563665 TNFAIP1Q13829 316 aa27.63■■■□□ 2.01
ZNF688-204ENST00000563665 SAMD7Q7Z3H4 446 aa27.63■■■□□ 2.01
ZNF688-204ENST00000563665 ZNF654Q8IZM8 581 aa27.63■■■□□ 2.01
ZNF688-204ENST00000563665 CRACR2BQ8N4Y2 399 aaPredicted RBP27.63■■■□□ 2.01
ZNF688-204ENST00000563665 CCDC17Q96LX7 622 aa27.63■■■□□ 2.01
ZNF688-204ENST00000563665 DNAJC18Q9H819 358 aa27.63■■■□□ 2.01
ZNF688-204ENST00000563665 IL17RBQ9NRM6 502 aa27.63■■■□□ 2.01
ZNF688-204ENST00000563665 NUCB2P80303 420 aa27.62■■■□□ 2.01
ZNF688-204ENST00000563665 TBC1D10BQ4KMP7 808 aaPredicted RBP27.62■■■□□ 2.01
ZNF688-204ENST00000563665 RCSD1Q6JBY9 416 aa27.62■■■□□ 2.01
ZNF688-204ENST00000563665 SMARCC2Q8TAQ2 1214 aa27.62■■■□□ 2.01
ZNF688-204ENST00000563665 TRIM34Q9BYJ4 488 aa27.62■■■□□ 2.01
ZNF688-204ENST00000563665 HERC5Q9UII4 1024 aaKnown RBP27.62■■■□□ 2.01
ZNF688-204ENST00000563665 NMT2O60551 498 aa27.61■■■□□ 2.01
ZNF688-204ENST00000563665 GJB2P29033 226 aa27.61■■■□□ 2.01
ZNF688-204ENST00000563665 RBM26Q5T8P6 1007 aaKnown RBP27.61■■■□□ 2.01
ZNF688-204ENST00000563665 MICU3Q86XE3 530 aa27.61■■■□□ 2.01
ZNF688-204ENST00000563665 NSUN7Q8NE18 718 aaKnown RBP27.61■■■□□ 2.01
ZNF688-204ENST00000563665 CSRNP1Q96S65 589 aa27.61■■■□□ 2.01
ZNF688-204ENST00000563665 NCOA5Q9HCD5 579 aaKnown RBP27.61■■■□□ 2.01
ZNF688-204ENST00000563665 GOLGA8AA7E2F4 631 aa27.6■■■□□ 2.01
ZNF688-204ENST00000563665 DDAH1O94760 285 aa27.6■■■□□ 2.01
ZNF688-204ENST00000563665 NOVP48745 357 aa27.6■■■□□ 2.01
ZNF688-204ENST00000563665 HMGN5P82970 282 aaKnown RBP27.6■■■□□ 2.01
ZNF688-204ENST00000563665 PPP2R5BQ15173 497 aa27.6■■■□□ 2.01
ZNF688-204ENST00000563665 TATDN1Q6P1N9 297 aa27.6■■■□□ 2.01
ZNF688-204ENST00000563665 CATIPQ7Z7H3 387 aa27.6■■■□□ 2.01
ZNF688-204ENST00000563665 DDNO94850 711 aaPredicted RBP27.59■■■□□ 2.01
ZNF688-204ENST00000563665 CTDNEP1O95476 244 aa27.59■■■□□ 2.01
ZNF688-204ENST00000563665 CALM1P0DP23 149 aa27.59■■■□□ 2.01
ZNF688-204ENST00000563665 CALM2P0DP24 149 aa27.59■■■□□ 2.01
ZNF688-204ENST00000563665 CALM3P0DP25 149 aa27.59■■■□□ 2.01
ZNF688-204ENST00000563665 PDIA4P13667 645 aaKnown RBP27.59■■■□□ 2.01
ZNF688-204ENST00000563665 PGAP2Q9UHJ9 254 aa27.59■■■□□ 2.01
ZNF688-204ENST00000563665 IGKV6D-41A0A0C4DH26 115 aa27.58■■■□□ 2.01
ZNF688-204ENST00000563665 RAB3GAP1Q15042 981 aa27.58■■■□□ 2.01
ZNF688-204ENST00000563665 MYH4Q9Y623 1939 aa27.58■■■□□ 2.01
ZNF688-204ENST00000563665 AKR1B1P15121 316 aa27.58■■■□□ 2
ZNF688-204ENST00000563665 LMOD1P29536 600 aaPredicted RBP27.58■■■□□ 2
ZNF688-204ENST00000563665 PPP4R3BQ5MIZ7 849 aa27.58■■■□□ 2
ZNF688-204ENST00000563665 CPLX2Q6PUV4 134 aaKnown RBP27.58■■■□□ 2
ZNF688-204ENST00000563665 TRPM4Q8TD43 1214 aa27.58■■■□□ 2
ZNF688-204ENST00000563665 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.58■■■□□ 2
ZNF688-204ENST00000563665 TMEM39BQ9GZU3 492 aa27.58■■■□□ 2
ZNF688-204ENST00000563665 CCDC196A0A1B0GTZ2 297 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 PTPDC1A2A3K4 754 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 CPLX1O14810 134 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 TBC1D12O60347 775 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 CDKL5O76039 1030 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 PDCP20941 246 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 EPS15P42566 896 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 TROAPQ12815 778 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 RTN1Q16799 776 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 DPY19L2Q6NUT2 758 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 RAB11FIP4Q86YS3 637 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 L3MBTL3Q96JM7 780 aaPredicted RBP27.57■■■□□ 2
ZNF688-204ENST00000563665 MYL10Q9BUA6 226 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 KAT14Q9H8E8 782 aa27.57■■■□□ 2
ZNF688-204ENST00000563665 FAM217BQ9NTX9 383 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms