RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
SPG7-206ENST00000562775 TCP11L1Q9NUJ3 509 aa16.45■□□□□ 0.22
SPG7-206ENST00000562775 GJA3Q9Y6H8 435 aa16.45■□□□□ 0.22
SPG7-206ENST00000562775 ZNF541Q9H0D2 1346 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 SBF1O95248 1867 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 MYO1BO43795 1136 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 CTDNEP1O95476 244 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 YBX3P16989 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
SPG7-206ENST00000562775 HMGN5P82970 282 aaKnown RBP16.44■□□□□ 0.22
SPG7-206ENST00000562775 PKP1Q13835 747 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
SPG7-206ENST00000562775 DGKHQ86XP1 1220 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 NID2Q14112 1375 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 ATRNL1Q5VV63 1379 aa16.44■□□□□ 0.22
SPG7-206ENST00000562775 CLRN2A0PK11 232 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 DDTLA6NHG4 134 aaPredicted RBP16.43■□□□□ 0.22
SPG7-206ENST00000562775 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 JAK2O60674 1132 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 BRD1O95696 1058 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 PDCP20941 246 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 SYT1P21579 422 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 FOXP4Q8IVH2 680 aaPredicted RBP16.43■□□□□ 0.22
SPG7-206ENST00000562775 ZNF654Q8IZM8 581 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 NEDD1Q8NHV4 660 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 ANKS1AQ92625 1134 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 ZDHHC9Q9Y397 364 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 WNT10BO00744 389 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 CPLX1O14810 134 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 NMT2O60551 498 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 RCSD1Q6JBY9 416 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
SPG7-206ENST00000562775 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 FAM151AQ8WW52 585 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
SPG7-206ENST00000562775 MYL10Q9BUA6 226 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
SPG7-206ENST00000562775 CNOT7Q9UIV1 285 aaKnown RBP16.43■□□□□ 0.22
SPG7-206ENST00000562775 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
SPG7-206ENST00000562775 SHTN1A0MZ66 631 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 TCP10L2B9ZVM9 353 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 STX6O43752 255 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 DTNBO60941 627 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 RXRAP19793 462 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 PPP2R5BQ15173 497 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 LARP1BQ659C4 914 aaKnown RBP16.42■□□□□ 0.22
SPG7-206ENST00000562775 CPLX2Q6PUV4 134 aaKnown RBP16.42■□□□□ 0.22
SPG7-206ENST00000562775 CATIPQ7Z7H3 387 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 METTL16Q86W50 562 aaKnown RBP16.42■□□□□ 0.22
SPG7-206ENST00000562775 GPC2Q8N158 579 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
SPG7-206ENST00000562775 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
SPG7-206ENST00000562775 PLIN4Q96Q06 1357 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 DDAH1O94760 285 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 CALM1P0DP23 149 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 CALM2P0DP24 149 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 CALM3P0DP25 149 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 CDC27P30260 824 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 SHMT1P34896 483 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
SPG7-206ENST00000562775 NBPF9Q3BBW0 867 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 FAM83AQ86UY5 434 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 DDX11Q96FC9 970 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 CCDC17Q96LX7 622 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
SPG7-206ENST00000562775 SIPA1L1O43166 1804 aa16.41■□□□□ 0.22
SPG7-206ENST00000562775 MYH8P13535 1937 aa16.4■□□□□ 0.22
SPG7-206ENST00000562775 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
SPG7-206ENST00000562775 CDKL5O76039 1030 aa16.4■□□□□ 0.22
SPG7-206ENST00000562775 RTN1Q16799 776 aa16.4■□□□□ 0.22
SPG7-206ENST00000562775 FANCBQ8NB91 859 aa16.4■□□□□ 0.22
SPG7-206ENST00000562775 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
SPG7-206ENST00000562775 VEZTQ9HBM0 779 aa16.4■□□□□ 0.22
SPG7-206ENST00000562775 RNF181Q9P0P0 153 aa16.4■□□□□ 0.22
SPG7-206ENST00000562775 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
SPG7-206ENST00000562775 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 H7C1D1 291 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 TROAPQ12815 778 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 NFKBIBQ15653 356 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 NTRK3Q16288 839 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 RBM26Q5T8P6 1007 aaKnown RBP16.39■□□□□ 0.21
SPG7-206ENST00000562775 CCDC144CPQ8IYA2 1237 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 TRIM34Q9BYJ4 488 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
SPG7-206ENST00000562775 EGFRP00533 1210 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 ZSCAN22P10073 491 aaPredicted RBP16.38■□□□□ 0.21
SPG7-206ENST00000562775 FDPSP14324 419 aaKnown RBP16.38■□□□□ 0.21
SPG7-206ENST00000562775 AKR1B1P15121 316 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 NOVP48745 357 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 TNNI2P48788 182 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 TATDN1Q6P1N9 297 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 CLEC17AQ6ZS10 378 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 SAMD7Q7Z3H4 446 aa16.38■□□□□ 0.21
SPG7-206ENST00000562775 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms