RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CALM1P0DP23 149 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 CALM2P0DP24 149 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 CALM3P0DP25 149 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 RASA1P20936 1047 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 ZNF280AP59817 542 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-205ENST00000562310 TFAP4Q01664 338 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 NFIAQ12857 509 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 NSUN7Q8NE18 718 aaKnown RBP16.71■□□□□ 0.27
COMMD4-205ENST00000562310 ZBED3Q96IU2 234 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-205ENST00000562310 GBP4Q96PP9 640 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 ZKSCAN3Q9BRR0 538 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
COMMD4-205ENST00000562310 FAM198AQ9UFP1 575 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 CCDC196A0A1B0GTZ2 297 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 BRD1O95696 1058 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 PRELPP51888 382 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
COMMD4-205ENST00000562310 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 MICU3Q86XE3 530 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 ZNF654Q8IZM8 581 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
COMMD4-205ENST00000562310 PRMT6Q96LA8 375 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-205ENST00000562310 ZNF70Q9UC06 446 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-205ENST00000562310 STX6O43752 255 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 FAM47AQ5JRC9 791 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 NEDD1Q8NHV4 660 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 TNPO1Q92973 898 aaKnown RBP16.69■□□□□ 0.26
COMMD4-205ENST00000562310 SENP2Q9HC62 589 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
COMMD4-205ENST00000562310 MYOZ2Q9NPC6 264 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 PI4KBQ9UBF8 816 aa16.69■□□□□ 0.26
COMMD4-205ENST00000562310 CTDNEP1O95476 244 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 SYT1P21579 422 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 GMPSP49915 693 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-205ENST00000562310 CACNB3P54284 484 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 RTN1Q16799 776 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 FOXP4Q8IVH2 680 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-205ENST00000562310 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-205ENST00000562310 CRACR2BQ8N4Y2 399 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-205ENST00000562310 RGS22Q8NE09 1264 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 CCDC17Q96LX7 622 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 TRIM34Q9BYJ4 488 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 ZNF541Q9H0D2 1346 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 STK36Q9NRP7 1315 aa16.68■□□□□ 0.26
COMMD4-205ENST00000562310 MYH6P13533 1939 aa16.67■□□□□ 0.26
COMMD4-205ENST00000562310 JAK2O60674 1132 aa16.67■□□□□ 0.26
COMMD4-205ENST00000562310 TCP10Q12799 353 aa16.67■□□□□ 0.26
COMMD4-205ENST00000562310 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
COMMD4-205ENST00000562310 FAM83AQ86UY5 434 aa16.67■□□□□ 0.26
COMMD4-205ENST00000562310 GPC2Q8N158 579 aa16.67■□□□□ 0.26
COMMD4-205ENST00000562310 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
COMMD4-205ENST00000562310 KAT14Q9H8E8 782 aa16.67■□□□□ 0.26
COMMD4-205ENST00000562310 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
COMMD4-205ENST00000562310 GJA3Q9Y6H8 435 aa16.67■□□□□ 0.26
COMMD4-205ENST00000562310 ZSCAN22P10073 491 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-205ENST00000562310 PTMSP20962 102 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 TNNI2P48788 182 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 TNFAIP1Q13829 316 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 PKP1Q13835 747 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 NFKBIBQ15653 356 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 METTL16Q86W50 562 aaKnown RBP16.66■□□□□ 0.26
COMMD4-205ENST00000562310 MICALL2Q8IY33 904 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 MAP3K14Q99558 947 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
COMMD4-205ENST00000562310 ZDHHC9Q9Y397 364 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 ATP6V1DQ9Y5K8 247 aa16.66■□□□□ 0.26
COMMD4-205ENST00000562310 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 DDTLA6NHG4 134 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-205ENST00000562310 WNT10BO00744 389 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 IFNAR1P17181 557 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 SHMT1P34896 483 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 RCSD1Q6JBY9 416 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 RAB11FIP4Q86YS3 637 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 FANCBQ8NB91 859 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 DDX11Q96FC9 970 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 MYL10Q9BUA6 226 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
COMMD4-205ENST00000562310 CNTNAP1P78357 1384 aa16.64■□□□□ 0.26
COMMD4-205ENST00000562310 VPS37CA5D8V6 355 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-205ENST00000562310 DDX11L8A8MPP1 907 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 H7C1D1 291 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 NMT2O60551 498 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 YBX3P16989 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
COMMD4-205ENST00000562310 KIF5BP33176 963 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 NOVP48745 357 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 TROAPQ12815 778 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 SH3BP5LQ7L8J4 393 aa16.64■□□□□ 0.25
COMMD4-205ENST00000562310 TRIM22Q8IYM9 498 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms