RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 USP48Q86UV5 1035 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 KIAA0825Q8IV33 1275 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
CDH13-205ENST00000562307 LARGE2Q8N3Y3 721 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 FBXO18Q8NFZ0 1043 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 MYL10Q9BUA6 226 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 OSBPL5Q9H0X9 879 aaPredicted RBP11.11□□□□□ -0.63
CDH13-205ENST00000562307 MKNK2Q9HBH9 465 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 DDX4Q9NQI0 724 aaKnown RBP11.11□□□□□ -0.63
CDH13-205ENST00000562307 IL17RBQ9NRM6 502 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 ZNRF3Q9ULT6 936 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 CDK5RAP2Q96SN8 1893 aa11.1□□□□□ -0.63
CDH13-205ENST00000562307 FOCADQ5VW36 1801 aa11.1□□□□□ -0.63
CDH13-205ENST00000562307 IARSP41252 1262 aaKnown RBP11.1□□□□□ -0.63
CDH13-205ENST00000562307 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
CDH13-205ENST00000562307 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
CDH13-205ENST00000562307 GSE1Q14687 1217 aa11.1□□□□□ -0.63
CDH13-205ENST00000562307 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
CDH13-205ENST00000562307 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
CDH13-205ENST00000562307 CRACR2BQ8N4Y2 399 aaPredicted RBP11.1□□□□□ -0.63
CDH13-205ENST00000562307 NEDD1Q8NHV4 660 aa11.1□□□□□ -0.63
CDH13-205ENST00000562307 EHD4Q9H223 541 aa11.1□□□□□ -0.63
CDH13-205ENST00000562307 ZNF277Q9NRM2 450 aaPredicted RBP11.1□□□□□ -0.63
CDH13-205ENST00000562307 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
CDH13-205ENST00000562307 CNPY2Q9Y2B0 182 aa11.1□□□□□ -0.63
CDH13-205ENST00000562307 DDX49Q9Y6V7 483 aaKnown RBP11.1□□□□□ -0.63
CDH13-205ENST00000562307 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 COL4A5P29400 1685 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 NMT2O60551 498 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 MBD3O95983 291 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 MMP14P50281 582 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 FUT2Q10981 343 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 FERMT3Q86UX7 667 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 CCDC144CPQ8IYA2 1237 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 SLC44A5Q8NCS7 719 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 AGBL3Q8NEM8 1001 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 GPT2Q8TD30 523 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 WASF1Q92558 559 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 C8orf76Q96K31 380 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
CDH13-205ENST00000562307 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 PSME4Q14997 1843 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 ELP1O95163 1332 aa11.09□□□□□ -0.63
CDH13-205ENST00000562307 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 NFKBIEO00221 500 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 PSMD14O00487 310 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 ENTPD3O75355 529 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 TSPY3P0CV98 308 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 TSPY8P0CW00 308 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 KRT85P78386 507 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 NFIAQ12857 509 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 SLC4A8Q2Y0W8 1093 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 FOXD4L6Q3SYB3 417 aaPredicted RBP11.08□□□□□ -0.64
CDH13-205ENST00000562307 CFAP100Q494V2 611 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 FOXD4L3Q6VB84 417 aaPredicted RBP11.08□□□□□ -0.64
CDH13-205ENST00000562307 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
CDH13-205ENST00000562307 NIM1KQ8IY84 436 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 TRIM22Q8IYM9 498 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 MTMR14Q8NCE2 650 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 NUP133Q8WUM0 1156 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 PHKBQ93100 1093 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 RNF26Q9BY78 433 aaPredicted RBP11.08□□□□□ -0.64
CDH13-205ENST00000562307 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
CDH13-205ENST00000562307 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
CDH13-205ENST00000562307 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
CDH13-205ENST00000562307 BRCA1P38398 1863 aaKnown RBP11.07□□□□□ -0.64
CDH13-205ENST00000562307 IGKV6D-41A0A0C4DH26 115 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 PSDA5PKW4 1024 aaPredicted RBP11.07□□□□□ -0.64
CDH13-205ENST00000562307 PRPF3O43395 683 aaKnown RBP11.07□□□□□ -0.64
CDH13-205ENST00000562307 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 RAD17O75943 681 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 DEXIO95424 95 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 HLA-DOAP06340 250 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 RBM5P52756 815 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDH13-205ENST00000562307 UBE2HP62256 183 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 CXCL9Q07325 125 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 PICALMQ13492 652 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 FAM173BQ6P4H8 233 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 TMTC3Q6ZXV5 915 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 BRAPQ7Z569 592 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 PRMT6Q96LA8 375 aaPredicted RBP11.07□□□□□ -0.64
CDH13-205ENST00000562307 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDH13-205ENST00000562307 SLC26A6Q9BXS9 759 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 KAT14Q9H8E8 782 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 GDPD2Q9HCC8 539 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 SERPINB13Q9UIV8 391 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 RCOR1Q9UKL0 485 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 HDAC9Q9UKV0 1011 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 CFAP45Q9UL16 551 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 PCDHAC2Q9Y5I4 1007 aa11.07□□□□□ -0.64
CDH13-205ENST00000562307 ATRNL1Q5VV63 1379 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 MYH1P12882 1939 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 SPDYE2BA6NHP3 402 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 GADD45BO75293 160 aaPredicted RBP11.06□□□□□ -0.64
CDH13-205ENST00000562307 SPDYE6P0CI01 402 aa11.06□□□□□ -0.64
CDH13-205ENST00000562307 NCLP19338 710 aaKnown RBP11.06□□□□□ -0.64
CDH13-205ENST00000562307 KIF5BP33176 963 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms