RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 STRIP1Q5VSL9 837 aa19.26■□□□□ 0.67
PKD1-225ENST00000562297 HHIPL2Q6UWX4 724 aa19.26■□□□□ 0.67
PKD1-225ENST00000562297 SLC44A5Q8NCS7 719 aa19.26■□□□□ 0.67
PKD1-225ENST00000562297 FTOQ9C0B1 505 aaKnown RBP eCLIP19.26■□□□□ 0.67
PKD1-225ENST00000562297 IL17RBQ9NRM6 502 aa19.26■□□□□ 0.67
PKD1-225ENST00000562297 MYH8P13535 1937 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 KIF28PB7ZC32 967 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 DDAH1O94760 285 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 POLR3DP05423 398 aaPredicted RBP19.25■□□□□ 0.67
PKD1-225ENST00000562297 GUCY1A2P33402 732 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 FKBP1AP62942 108 aaKnown RBP19.25■□□□□ 0.67
PKD1-225ENST00000562297 KIAA2012Q0VF49 1180 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 DACT2Q5SW24 774 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 CATIPQ7Z7H3 387 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 CMTR1Q8N1G2 835 aaKnown RBP19.25■□□□□ 0.67
PKD1-225ENST00000562297 SYAP1Q96A49 352 aaPredicted RBP19.25■□□□□ 0.67
PKD1-225ENST00000562297 PGBD1Q96JS3 809 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 USP28Q96RU2 1077 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 GRPEL1Q9HAV7 217 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 BAZ2BQ9UIF8 2168 aaKnown RBP19.25■□□□□ 0.67
PKD1-225ENST00000562297 SYCE3A1L190 88 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 MRE11P49959 708 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 TFAP4Q01664 338 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 KRT40Q6A162 431 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 C16orf86Q6ZW13 317 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 RCOR1Q9UKL0 485 aa19.25■□□□□ 0.67
PKD1-225ENST00000562297 C21orf2O43822 256 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 WDHD1O75717 1129 aaPredicted RBP19.24■□□□□ 0.67
PKD1-225ENST00000562297 RASA1P20936 1047 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 SCNN1DP51172 638 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 AOC3Q16853 763 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 APOBEC3HQ6NTF7 200 aaKnown RBP19.24■□□□□ 0.67
PKD1-225ENST00000562297 ILDR2Q71H61 639 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 BRAPQ7Z569 592 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 ANKS1AQ92625 1134 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 CALM1P0DP23 149 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 CALM2P0DP24 149 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 CALM3P0DP25 149 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 TTLL6Q8N841 843 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 MKNK2Q9HBH9 465 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 TCP11L1Q9NUJ3 509 aa19.24■□□□□ 0.67
PKD1-225ENST00000562297 TPRNQ4KMQ1 711 aa19.23■□□□□ 0.67
PKD1-225ENST00000562297 CCDC183Q5T5S1 534 aa19.23■□□□□ 0.67
PKD1-225ENST00000562297 LRSAM1Q6UWE0 723 aa19.23■□□□□ 0.67
PKD1-225ENST00000562297 CCDC125Q86Z20 511 aa19.23■□□□□ 0.67
PKD1-225ENST00000562297 TRIM22Q8IYM9 498 aa19.23■□□□□ 0.67
PKD1-225ENST00000562297 TEKT1Q969V4 418 aa19.23■□□□□ 0.67
PKD1-225ENST00000562297 ZNF396Q96N95 335 aaPredicted RBP19.23■□□□□ 0.67
PKD1-225ENST00000562297 MRIQ9BWK5 157 aa19.23■□□□□ 0.67
PKD1-225ENST00000562297 DDX4Q9NQI0 724 aaKnown RBP19.23■□□□□ 0.67
PKD1-225ENST00000562297 DEXIO95424 95 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 DPEP1P16444 411 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 CDK8P49336 464 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 DGKHQ86XP1 1220 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 CCDC82Q8N4S0 544 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 WASF1Q92558 559 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 RNF26Q9BY78 433 aaPredicted RBP19.22■□□□□ 0.67
PKD1-225ENST00000562297 RBM28Q9NW13 759 aaKnown RBP19.22■□□□□ 0.67
PKD1-225ENST00000562297 BRCA1P38398 1863 aaKnown RBP19.22■□□□□ 0.67
PKD1-225ENST00000562297 USP17L3A6NCW0 530 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 USP17L4A6NCW7 530 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 CEBPZQ03701 1054 aaKnown RBP19.22■□□□□ 0.67
PKD1-225ENST00000562297 MYSM1Q5VVJ2 828 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 CDC42EP5Q6NZY7 148 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 USP17L1Q7RTZ2 530 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 SUPT20HQ8NEM7 779 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 ZDHHC15Q96MV8 337 aa19.22■□□□□ 0.67
PKD1-225ENST00000562297 LIG1P18858 919 aa19.21■□□□□ 0.67
PKD1-225ENST00000562297 U2AF2P26368 475 aaKnown RBP eCLIP19.21■□□□□ 0.675e-8■■■■■ 34.6
PKD1-225ENST00000562297 CRKP46108 304 aa19.21■□□□□ 0.67
PKD1-225ENST00000562297 GRIPAP1Q4V328 841 aa19.21■□□□□ 0.67
PKD1-225ENST00000562297 RTEL1Q9NZ71 1219 aa19.21■□□□□ 0.67
PKD1-225ENST00000562297 YDJCA8MPS7 323 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 TSPY3P0CV98 308 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 TSPY8P0CW00 308 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 GABPAQ06546 454 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 TMTC3Q6ZXV5 915 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 KIAA0825Q8IV33 1275 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 ZNF444Q8N0Y2 327 aaPredicted RBP19.2■□□□□ 0.66
PKD1-225ENST00000562297 ZNF287Q9HBT7 754 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 USP40Q9NVE5 1235 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 SIPA1L1O43166 1804 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 COL4A5P29400 1685 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 HDLBPQ00341 1268 aaKnown RBP19.2■□□□□ 0.66
PKD1-225ENST00000562297 PKN1Q16512 942 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 SHISA4Q96DD7 197 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 PANK2Q9BZ23 570 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 POLR3EQ9NVU0 708 aa19.2■□□□□ 0.66
PKD1-225ENST00000562297 PPIP5K2O43314 1243 aa19.19■□□□□ 0.66
PKD1-225ENST00000562297 PICALMQ13492 652 aa19.19■□□□□ 0.66
PKD1-225ENST00000562297 CCDC178Q5BJE1 867 aa19.19■□□□□ 0.66
PKD1-225ENST00000562297 PSMD1Q99460 953 aa19.19■□□□□ 0.66
PKD1-225ENST00000562297 PCDHAC2Q9Y5I4 1007 aa19.19■□□□□ 0.66
PKD1-225ENST00000562297 CNTNAP5Q8WYK1 1306 aa19.19■□□□□ 0.66
PKD1-225ENST00000562297 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
PKD1-225ENST00000562297 MMP1P03956 469 aa19.18■□□□□ 0.66
PKD1-225ENST00000562297 NASPP49321 788 aaPredicted RBP19.18■□□□□ 0.66
PKD1-225ENST00000562297 TRIM29Q14134 588 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms