RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 GINM1Q9NU53 330 aa18.46■□□□□ 0.55
KLHDC4-208ENST00000562261 DLL1O00548 723 aa18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 GDF11O95390 407 aa18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 GRK4P32298 578 aa18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 BACE1P56817 501 aa18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 PABPC4Q13310 644 aaKnown RBP eCLIP18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 MTMR2Q13614 643 aa18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 PDE3AQ14432 1141 aa18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 FAM110CQ1W6H9 321 aa18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 ANKRD13CQ8N6S4 541 aa18.45■□□□□ 0.54
KLHDC4-208ENST00000562261 DDX60LQ5H9U9 1706 aaKnown RBP18.44■□□□□ 0.54
KLHDC4-208ENST00000562261 SHROOM1Q2M3G4 852 aaPredicted RBP18.44■□□□□ 0.54
KLHDC4-208ENST00000562261 DNAJC2Q99543 621 aaKnown RBP18.44■□□□□ 0.54
KLHDC4-208ENST00000562261 RIOK1Q9BRS2 568 aaKnown RBP18.44■□□□□ 0.54
KLHDC4-208ENST00000562261 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
KLHDC4-208ENST00000562261 ZBTB21Q9ULJ3 1066 aa18.44■□□□□ 0.54
KLHDC4-208ENST00000562261 GABRQQ9UN88 632 aa18.44■□□□□ 0.54
KLHDC4-208ENST00000562261 GOLIM4O00461 696 aa18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 TNPO2O14787 897 aaKnown RBP18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 PDE6AP16499 860 aa18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 MTFR1Q15390 333 aa18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 SLC9C2Q5TAH2 1124 aa18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 ASCC2Q9H1I8 757 aaPredicted RBP18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 EHD4Q9H223 541 aa18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 TMOD4Q9NZQ9 345 aa18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 SERPINB13Q9UIV8 391 aa18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 NAV1Q8NEY1 1877 aa18.43■□□□□ 0.54
KLHDC4-208ENST00000562261 MAGEB6P1A0A0J9YX57 407 aa18.42■□□□□ 0.54
KLHDC4-208ENST00000562261 C19orf81C9J6K1 198 aa18.42■□□□□ 0.54
KLHDC4-208ENST00000562261 USP17L10C9JJH3 530 aa18.42■□□□□ 0.54
KLHDC4-208ENST00000562261 GCLCP48506 637 aaPredicted RBP18.42■□□□□ 0.54
KLHDC4-208ENST00000562261 TTC6Q86TZ1 520 aa18.42■□□□□ 0.54
KLHDC4-208ENST00000562261 SLAIN1Q8ND83 568 aa18.42■□□□□ 0.54
KLHDC4-208ENST00000562261 H0YGN5 161 aa18.41■□□□□ 0.54
KLHDC4-208ENST00000562261 FLT3LGP49771 235 aa18.41■□□□□ 0.54
KLHDC4-208ENST00000562261 UBXN2AP68543 259 aa18.41■□□□□ 0.54
KLHDC4-208ENST00000562261 TATDN1Q6P1N9 297 aa18.41■□□□□ 0.54
KLHDC4-208ENST00000562261 ZNF532Q9HCE3 1301 aa18.41■□□□□ 0.54
KLHDC4-208ENST00000562261 TCRBV5S4A2TA0A5A2 114 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 GH2P01242 217 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 PLCD1P51178 756 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 IRX3P78415 501 aaPredicted RBP18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 IRF5Q13568 498 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 SLC17A8Q8NDX2 589 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 COA7Q96BR5 231 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 CRNKL1Q9BZJ0 848 aaKnown RBP18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 BOLA2Q9H3K6 86 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 PAG1Q9NWQ8 432 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 BIN2Q9UBW5 565 aaPredicted RBP18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 DOCK3Q8IZD9 2030 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 TRIOBPQ9H2D6 2365 aa18.4■□□□□ 0.54
KLHDC4-208ENST00000562261 ADCY3O60266 1144 aa18.39■□□□□ 0.53
KLHDC4-208ENST00000562261 CCL5P13501 91 aa18.39■□□□□ 0.53
KLHDC4-208ENST00000562261 ATP5JP18859 108 aa18.39■□□□□ 0.53
KLHDC4-208ENST00000562261 PXYLP1Q8TE99 480 aa18.39■□□□□ 0.53
KLHDC4-208ENST00000562261 SHISA4Q96DD7 197 aa18.39■□□□□ 0.53
KLHDC4-208ENST00000562261 LRRCC1Q9C099 1032 aa18.39■□□□□ 0.53
KLHDC4-208ENST00000562261 CERKLQ49MI3 558 aaPredicted RBP18.38■□□□□ 0.53
KLHDC4-208ENST00000562261 USP17L2Q6R6M4 530 aa18.38■□□□□ 0.53
KLHDC4-208ENST00000562261 CHRDL2Q6WN34 429 aa18.38■□□□□ 0.53
KLHDC4-208ENST00000562261 LCORLQ8N3X6 602 aa18.38■□□□□ 0.53
KLHDC4-208ENST00000562261 NKX2-3Q8TAU0 364 aa18.38■□□□□ 0.53
KLHDC4-208ENST00000562261 RNF208Q9H0X6 261 aa18.38■□□□□ 0.53
KLHDC4-208ENST00000562261 MORF4L1Q9UBU8 362 aa18.38■□□□□ 0.53
KLHDC4-208ENST00000562261 POLR3DP05423 398 aaPredicted RBP18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 GJB1P08034 283 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 ELNP15502 786 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 SHMT1P34896 483 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 ADD2P35612 726 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 GABPAQ06546 454 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 SDR42E1Q8WUS8 393 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 HAUS7Q99871 368 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 EMILIN3Q9NT22 766 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 MCM9Q9NXL9 1143 aa18.37■□□□□ 0.53
KLHDC4-208ENST00000562261 INHAP05111 366 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 MYH7P12883 1935 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 GJA8P48165 433 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 HERVK_113P62684 666 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 RAB3GAP1Q15042 981 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 ABCB5Q2M3G0 1257 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 C12orf42Q96LP6 360 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 FEZ1Q99689 392 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 CABP5Q9NP86 173 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 TAOK2Q9UL54 1235 aa18.36■□□□□ 0.53
KLHDC4-208ENST00000562261 CEP290O15078 2479 aa18.35■□□□□ 0.53
KLHDC4-208ENST00000562261 SMARCA5O60264 1052 aaPredicted RBP18.35■□□□□ 0.53
KLHDC4-208ENST00000562261 SLFNL1Q499Z3 407 aa18.35■□□□□ 0.53
KLHDC4-208ENST00000562261 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
KLHDC4-208ENST00000562261 ARMT1Q9H993 441 aa18.35■□□□□ 0.53
KLHDC4-208ENST00000562261 TXNRD2Q9NNW7 524 aa18.35■□□□□ 0.53
KLHDC4-208ENST00000562261 MBD4O95243 580 aa18.34■□□□□ 0.53
KLHDC4-208ENST00000562261 USP14P54578 494 aa18.34■□□□□ 0.53
KLHDC4-208ENST00000562261 EVX2Q03828 476 aa18.34■□□□□ 0.53
KLHDC4-208ENST00000562261 ZYXQ15942 572 aaKnown RBP18.34■□□□□ 0.53
KLHDC4-208ENST00000562261 GPRC5AQ8NFJ5 357 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms