RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 GTPBP10A4D1E9 387 aaKnown RBP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 ORC4O43929 436 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 BBOX1O75936 387 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 ITGB2P05107 769 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 MYL3P08590 195 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 HOXD10P28358 340 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 DNAJA1P31689 397 aaKnown RBP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 RBM5P52756 815 aaKnown RBP eCLIP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 MRPL58Q14197 206 aaKnown RBP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 PPP2R5AQ15172 486 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 FXNQ16595 210 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 ALKBH2Q6NS38 261 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 PPP4R4Q6NUP7 873 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 ZCCHC8Q6NZY4 707 aaKnown RBP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 C11orf74Q86VG3 221 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 GOLGA6L1Q8N7Z2 621 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 ZFPM2Q8WW38 1151 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 SERINC2Q96SA4 455 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 DNAJC25Q9H1X3 360 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 CRISPLD1Q9H336 500 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 NDFIP2Q9NV92 336 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 CABP1Q9NZU7 370 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 GDF2Q9UK05 429 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 PPP2R3BQ9Y5P8 575 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 PARP3Q9Y6F1 533 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 COL17A1Q9UMD9 1497 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 ZNF608Q9ULD9 1512 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-211ENST00000562199 ANKRD30AQ9BXX3 1397 aa6.44□□□□□ -1.38
CAPN3-211ENST00000562199 EIF2AK4Q9P2K8 1649 aaKnown RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 A0A1W2PNR3 127 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 DCDC2BA2VCK2 349 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 TMEM229AB2RXF0 380 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 C19orf81C9J6K1 198 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 BOLA2-SMG1P6H3BVE0 249 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 DIAPH1O60610 1272 aaKnown RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 SKIP12755 728 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 XBP1P17861 261 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 LMOD1P29536 600 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 GEMIN4P57678 1058 aaKnown RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 GPSM2P81274 684 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 LRCH2Q5VUJ6 765 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 LMBRD2Q68DH5 695 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 CDC37L1Q7L3B6 337 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 HDGFL2Q7Z4V5 671 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 DAAM2Q86T65 1068 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 TAX1BP1Q86VP1 789 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 TMC1Q8TDI8 760 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 TBC1D31Q96DN5 1066 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 CDK5RAP3Q96JB5 506 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 PNNQ9H307 717 aaKnown RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 RABL2AQ9UBK7 228 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 FBXO2Q9UK22 296 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 MKL2Q9ULH7 1088 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 PCDHGC4Q9Y5F7 938 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 USP3Q9Y6I4 520 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 DDX49Q9Y6V7 483 aaKnown RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 CLASP1Q7Z460 1538 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 GPATCH8Q9UKJ3 1502 aaKnown RBP6.43□□□□□ -1.38
CAPN3-211ENST00000562199 ARHGEF5Q12774 1597 aa6.43□□□□□ -1.38
CAPN3-211ENST00000562199 ANKRD50Q9ULJ7 1429 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 PRDM15P57071 1507 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 PALM3A6NDB9 673 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 NEURL1BA8MQ27 555 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 PRRT4C9JH25 899 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 KHNYNO15037 678 aaKnown RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 ATXN7O15265 892 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 FIBPO43427 364 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 PPFIA2O75334 1257 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 TCEA3O75764 348 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 MYL1P05976 194 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 MSL3P1P0C860 447 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 CAPN2P17655 700 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 ATP4AP20648 1035 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 ENPP1P22413 925 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 SLC4A8Q2Y0W8 1093 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 PARP10Q53GL7 1025 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 COBLL1Q53SF7 1204 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 FAM133BQ5BKY9 247 aaKnown RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 SPECC1Q5M775 1068 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 ACBD5Q5T8D3 534 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 FIGNL1Q6PIW4 674 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 IFNL3Q8IZI9 196 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 CCDC191Q8NCU4 936 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 TDRD7Q8NHU6 1098 aaKnown RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 EXOC6Q8TAG9 804 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 TGIF2Q9GZN2 237 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 ZNF700Q9H0M5 742 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 CCSER2Q9H7U1 834 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 PTPRHQ9HD43 1115 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 DNAAF2Q9NVR5 837 aaKnown RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 TRMT1Q9NXH9 659 aaKnown RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 BIN2Q9UBW5 565 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 PGAP2Q9UHJ9 254 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 RCAN3Q9UKA8 241 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 ITM2BQ9Y287 266 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 PCDHGA11Q9Y5H2 935 aa6.42□□□□□ -1.38
CAPN3-211ENST00000562199 RNF17Q9BXT8 1623 aaKnown RBP6.42□□□□□ -1.38
CAPN3-211ENST00000562199 SHTN1A0MZ66 631 aa6.41□□□□□ -1.38
CAPN3-211ENST00000562199 KRBA1A5PL33 1030 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms