RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 CTAGE8P0CG41 777 aa21.2■□□□□ 0.98
BBS4-204ENST00000562084 NKX1-1Q15270 411 aaPredicted RBP21.2■□□□□ 0.98
BBS4-204ENST00000562084 WASHC4Q2M389 1173 aa21.2■□□□□ 0.98
BBS4-204ENST00000562084 WDR93Q6P2C0 686 aa21.2■□□□□ 0.98
BBS4-204ENST00000562084 CTAGE6Q86UF2 777 aa21.2■□□□□ 0.98
BBS4-204ENST00000562084 CNGA4Q8IV77 575 aa21.2■□□□□ 0.98
BBS4-204ENST00000562084 CTAGE4Q8IX94 777 aa21.2■□□□□ 0.98
BBS4-204ENST00000562084 CLIC6Q96NY7 704 aa21.2■□□□□ 0.98
BBS4-204ENST00000562084 AKAP2Q9Y2D5 859 aa21.2■□□□□ 0.98
BBS4-204ENST00000562084 ITIH6Q6UXX5 1313 aa21.19■□□□□ 0.98
BBS4-204ENST00000562084 SH2B2O14492 632 aaPredicted RBP21.19■□□□□ 0.98
BBS4-204ENST00000562084 TRIM66O15016 1216 aa21.19■□□□□ 0.98
BBS4-204ENST00000562084 GYS2P54840 703 aa21.19■□□□□ 0.98
BBS4-204ENST00000562084 HAND2P61296 217 aa21.19■□□□□ 0.98
BBS4-204ENST00000562084 FMR1Q06787 632 aaKnown RBP eCLIP21.19■□□□□ 0.98
BBS4-204ENST00000562084 KIF4BQ2VIQ3 1234 aa21.19■□□□□ 0.98
BBS4-204ENST00000562084 SPATA20Q8TB22 786 aa21.19■□□□□ 0.98
BBS4-204ENST00000562084 ABCB6Q9NP58 842 aa21.19■□□□□ 0.98
BBS4-204ENST00000562084 ECM29Q5VYK3 1845 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 PTPREP23469 700 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 IARSP41252 1262 aaKnown RBP21.18■□□□□ 0.98
BBS4-204ENST00000562084 SLC39A6Q13433 755 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 CASP8Q14790 479 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 FILIP1LQ4L180 1135 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 TTC5Q8N0Z6 440 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 PPM1EQ8WY54 764 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 ZNF496Q96IT1 587 aaPredicted RBP21.18■□□□□ 0.98
BBS4-204ENST00000562084 PNKPQ96T60 521 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 NAPGQ99747 312 aaPredicted RBP21.18■□□□□ 0.98
BBS4-204ENST00000562084 FAM107BQ9H098 131 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 PBX1P40424 430 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 SPATA1Q5VX52 437 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 CWC25Q9NXE8 425 aaPredicted RBP21.18■□□□□ 0.98
BBS4-204ENST00000562084 CEP131Q9UPN4 1083 aa21.18■□□□□ 0.98
BBS4-204ENST00000562084 EP400Q96L91 3159 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 SOWAHDA6NJG2 315 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 MFAP3LO75121 409 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 SAFBQ15424 915 aaKnown RBP eCLIP21.17■□□□□ 0.98
BBS4-204ENST00000562084 TTC31Q49AM3 519 aaPredicted RBP21.17■□□□□ 0.98
BBS4-204ENST00000562084 RILPL1Q5EBL4 403 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 ZNF569Q5MCW4 686 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 ICE2Q659A1 982 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 RAD9BQ6WBX8 426 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 TMTC1Q8IUR5 882 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 NOSTRINQ8IVI9 506 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 IGSF22Q8N9C0 903 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 LZTFL1Q9NQ48 299 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 CEP126Q9P2H0 1117 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 PUF60Q9UHX1 559 aaKnown RBP21.17■□□□□ 0.98
BBS4-204ENST00000562084 FAN1Q9Y2M0 1017 aa21.17■□□□□ 0.98
BBS4-204ENST00000562084 TOGARAM1Q9Y4F4 1720 aa21.16■□□□□ 0.98
BBS4-204ENST00000562084 SBF2Q86WG5 1849 aa21.16■□□□□ 0.98
BBS4-204ENST00000562084 ATP5J2-PTCD1G3V325 749 aa21.16■□□□□ 0.98
BBS4-204ENST00000562084 PTCD1O75127 700 aaKnown RBP21.16■□□□□ 0.98
BBS4-204ENST00000562084 AARSP49588 968 aaKnown RBP eCLIP21.16■□□□□ 0.98
BBS4-204ENST00000562084 APOA5Q6Q788 366 aa21.16■□□□□ 0.98
BBS4-204ENST00000562084 DCAF5Q96JK2 942 aa21.16■□□□□ 0.98
BBS4-204ENST00000562084 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.16■□□□□ 0.983e-8■■■■■ 29.5
BBS4-204ENST00000562084 NID2Q14112 1375 aa21.16■□□□□ 0.98
BBS4-204ENST00000562084 IRX3P78415 501 aaPredicted RBP21.15■□□□□ 0.98
BBS4-204ENST00000562084 MAP9Q49MG5 647 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 SGMS1Q86VZ5 419 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 TEX13AQ9BXU3 409 aaPredicted RBP21.15■□□□□ 0.98
BBS4-204ENST00000562084 FBXO2Q9UK22 296 aaPredicted RBP21.15■□□□□ 0.98
BBS4-204ENST00000562084 WWC3Q9ULE0 1092 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 TBC1D2BQ9UPU7 963 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 MYH7P12883 1935 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 ZBTB43O43298 467 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 CORO7P57737 925 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 FKBP4Q02790 459 aaKnown RBP eCLIP21.15■□□□□ 0.98
BBS4-204ENST00000562084 TRIM14Q14142 442 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 MTF1Q14872 753 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 NTRK3Q16288 839 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 STK11IPQ8N1F8 1099 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 ITGB4P16144 1822 aa21.15■□□□□ 0.98
BBS4-204ENST00000562084 TJP1Q07157 1748 aa21.14■□□□□ 0.98
BBS4-204ENST00000562084 RBL2Q08999 1139 aa21.14■□□□□ 0.97
BBS4-204ENST00000562084 PTPN21Q16825 1174 aa21.14■□□□□ 0.97
BBS4-204ENST00000562084 APTXQ7Z2E3 356 aaKnown RBP21.14■□□□□ 0.97
BBS4-204ENST00000562084 AIFM3Q96NN9 605 aa21.14■□□□□ 0.97
BBS4-204ENST00000562084 FOXP1Q9H334 677 aaPredicted RBP21.14■□□□□ 0.97
BBS4-204ENST00000562084 ZSWIM4Q9H7M6 989 aa21.14■□□□□ 0.97
BBS4-204ENST00000562084 SAMSN1Q9NSI8 373 aaKnown RBP21.14■□□□□ 0.97
BBS4-204ENST00000562084 ADD3Q9UEY8 706 aaKnown RBP21.14■□□□□ 0.97
BBS4-204ENST00000562084 GPAA1O43292 621 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 PPFIA4O75335 1185 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 CPP00450 1065 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 SSRP1Q08945 709 aaKnown RBP21.13■□□□□ 0.97
BBS4-204ENST00000562084 CDKAL1Q5VV42 579 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 CCDC102AQ96A19 550 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 SERTAD1Q9UHV2 236 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 SRPRBQ9Y5M8 271 aaKnown RBP21.13■□□□□ 0.97
BBS4-204ENST00000562084 BCL9O00512 1426 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 EIF3CLB5ME19 914 aaKnown RBP21.13■□□□□ 0.97
BBS4-204ENST00000562084 FOXN1O15353 648 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 POLR2DO15514 142 aaKnown RBP21.13■□□□□ 0.97
BBS4-204ENST00000562084 FMNL1O95466 1100 aaPredicted RBP21.13■□□□□ 0.97
BBS4-204ENST00000562084 VSNL1P62760 191 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 FAM196AQ6ZSG2 479 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms