RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 YARSP54577 528 aaKnown RBP8.86□□□□□ -0.99
DENND4A-204ENST00000562028 NKAPLQ5M9Q1 402 aa8.86□□□□□ -0.99
DENND4A-204ENST00000562028 RBBP8NLQ8NC74 664 aaPredicted RBP8.86□□□□□ -0.99
DENND4A-204ENST00000562028 PSMG3-AS1Q96PY0 264 aa8.86□□□□□ -0.99
DENND4A-204ENST00000562028 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.86□□□□□ -0.99
DENND4A-204ENST00000562028 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
DENND4A-204ENST00000562028 FOXQ1Q9C009 403 aa8.86□□□□□ -0.99
DENND4A-204ENST00000562028 PRKAG2Q9UGJ0 569 aa8.86□□□□□ -0.99
DENND4A-204ENST00000562028 SLC22A31A6NKX4 558 aa8.85□□□□□ -0.99
DENND4A-204ENST00000562028 MEIS3P2A8K0S8 358 aa8.85□□□□□ -0.99
DENND4A-204ENST00000562028 RSPO4Q2I0M5 234 aaPredicted RBP8.85□□□□□ -0.99
DENND4A-204ENST00000562028 ARMCX6Q7L4S7 300 aa8.85□□□□□ -0.99
DENND4A-204ENST00000562028 MCF2L2Q86YR7 1114 aa8.85□□□□□ -0.99
DENND4A-204ENST00000562028 SLFN12Q8IYM2 578 aa8.85□□□□□ -0.99
DENND4A-204ENST00000562028 MFSD2AQ8NA29 543 aa8.85□□□□□ -0.99
DENND4A-204ENST00000562028 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
DENND4A-204ENST00000562028 LGR6Q9HBX8 967 aa8.85□□□□□ -0.99
DENND4A-204ENST00000562028 DNAJA2O60884 412 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 SF3A1Q15459 793 aaKnown RBP8.84□□□□□ -0.99
DENND4A-204ENST00000562028 PRAMEF13Q5VWM6 474 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 FBXW10Q5XX13 1052 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 RNF43Q68DV7 783 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 GIMAP7Q8NHV1 300 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 CPLX3Q8WVH0 158 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 TMEM40Q8WWA1 233 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 CRBNQ96SW2 442 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 KLHL3Q9UH77 587 aa8.84□□□□□ -0.99
DENND4A-204ENST00000562028 CHURC1-FNTBB4DL54 471 aa8.83□□□□□ -1
DENND4A-204ENST00000562028 GSC2O15499 205 aa8.83□□□□□ -1
DENND4A-204ENST00000562028 GIPRP48546 466 aa8.83□□□□□ -1
DENND4A-204ENST00000562028 EIF6P56537 245 aaKnown RBP8.83□□□□□ -1
DENND4A-204ENST00000562028 CDCP2Q5VXM1 449 aa8.83□□□□□ -1
DENND4A-204ENST00000562028 CCDC81Q6ZN84 652 aa8.83□□□□□ -1
DENND4A-204ENST00000562028 SLC51AQ86UW1 340 aa8.83□□□□□ -1
DENND4A-204ENST00000562028 OR6P1Q8NGX9 317 aa8.83□□□□□ -1
DENND4A-204ENST00000562028 TANGO6Q9C0B7 1094 aa8.83□□□□□ -1
DENND4A-204ENST00000562028 UPK3BL1B0FP48 263 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 UPK3BL2E5RIL1 263 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 SSBP05455 408 aaKnown RBP eCLIP8.82□□□□□ -1
DENND4A-204ENST00000562028 NFIAQ12857 509 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 OVOS1Q6IE37 1185 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 ZAR1Q86SH2 424 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 SREK1Q8WXA9 508 aaKnown RBP8.82□□□□□ -1
DENND4A-204ENST00000562028 GATA6Q92908 595 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 ATG4CQ96DT6 458 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 SHDQ96IW2 340 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 TBC1D32Q96NH3 1257 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 ANTXR1Q9H6X2 564 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 CNNM2Q9H8M5 875 aa8.82□□□□□ -1
DENND4A-204ENST00000562028 DYRK3O43781 588 aa8.81□□□□□ -1
DENND4A-204ENST00000562028 CDK5R2Q13319 367 aa8.81□□□□□ -1
DENND4A-204ENST00000562028 NLRC3Q7RTR2 1065 aa8.81□□□□□ -1
DENND4A-204ENST00000562028 TM9SF2Q99805 663 aa8.81□□□□□ -1
DENND4A-204ENST00000562028 DPH2Q9BQC3 489 aaPredicted RBP8.81□□□□□ -1
DENND4A-204ENST00000562028 DBNDD2Q9BQY9 259 aa8.81□□□□□ -1
DENND4A-204ENST00000562028 PRDM10Q9NQV6 1147 aa8.81□□□□□ -1
DENND4A-204ENST00000562028 IGLV1-40P01703 118 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 FSTP19883 344 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 ATP2B1P20020 1258 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 ADMP35318 185 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 ARSHQ5FYA8 562 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 INTS3Q68E01 1043 aaKnown RBP8.8□□□□□ -1
DENND4A-204ENST00000562028 OGFOD3Q6PK18 319 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 LSRQ86X29 649 aaPredicted RBP8.8□□□□□ -1
DENND4A-204ENST00000562028 TAB3Q8N5C8 712 aaPredicted RBP8.8□□□□□ -1
DENND4A-204ENST00000562028 CYB5D2Q8WUJ1 264 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 CCDC74BQ96LY2 380 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 MFSD14AQ96MC6 490 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 DUSP23Q9BVJ7 150 aa8.8□□□□□ -1
DENND4A-204ENST00000562028 TNFRSF10CO14798 259 aa8.79□□□□□ -1
DENND4A-204ENST00000562028 NME1P15531 152 aaKnown RBP8.79□□□□□ -1
DENND4A-204ENST00000562028 RAG1P15918 1043 aa8.79□□□□□ -1
DENND4A-204ENST00000562028 CYP27A1Q02318 531 aa8.79□□□□□ -1
DENND4A-204ENST00000562028 ARMC5Q96C12 935 aa8.79□□□□□ -1
DENND4A-204ENST00000562028 RGS13O14921 159 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 SLITRK5O94991 958 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 CCNFP41002 786 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 LETMD1Q6P1Q0 360 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 PHACTR4Q8IZ21 702 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 TOP6BLQ8N6T0 577 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 XAGE3Q8WTP9 111 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 ANAPC16Q96DE5 110 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 MIPEPQ99797 713 aa8.78□□□□□ -1
DENND4A-204ENST00000562028 F13BP05160 661 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 FAM87AP0C7U9 286 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 GUCY2CP25092 1073 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 CYP27C1Q4G0S4 372 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 FBXL6Q8N531 539 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 C19orf47Q8N9M1 422 aaKnown RBP8.77□□□□□ -1.01
DENND4A-204ENST00000562028 DRC1Q96MC2 740 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 METTL22Q9BUU2 404 aaPredicted RBP8.77□□□□□ -1.01
DENND4A-204ENST00000562028 ZNF408Q9H9D4 720 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 CEP131Q9UPN4 1083 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 MRVI1Q9Y6F6 885 aa8.77□□□□□ -1.01
DENND4A-204ENST00000562028 LEFTY1O75610 366 aa8.76□□□□□ -1.01
DENND4A-204ENST00000562028 FURINP09958 794 aa8.76□□□□□ -1.01
DENND4A-204ENST00000562028 CPSF6Q16630 551 aaKnown RBP eCLIP8.76□□□□□ -1.01
DENND4A-204ENST00000562028 DUSP27Q5VZP5 1158 aa8.76□□□□□ -1.01
DENND4A-204ENST00000562028 ZNF746Q6NUN9 644 aaPredicted RBP8.76□□□□□ -1.01
DENND4A-204ENST00000562028 SHISA5Q8N114 240 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms