RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PPARAQ07869 468 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 DPF2Q92785 391 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 FOXN1O15353 648 aa12.55□□□□□ -0.4
NEIL1-202ENST00000561643 NR5A1Q13285 461 aa12.55□□□□□ -0.4
NEIL1-202ENST00000561643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.55□□□□□ -0.4
NEIL1-202ENST00000561643 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
NEIL1-202ENST00000561643 CRACR2BQ8N4Y2 399 aaPredicted RBP12.55□□□□□ -0.4
NEIL1-202ENST00000561643 FANCBQ8NB91 859 aa12.55□□□□□ -0.4
NEIL1-202ENST00000561643 NEK11Q8NG66 645 aa12.55□□□□□ -0.4
NEIL1-202ENST00000561643 SDR42E1Q8WUS8 393 aa12.55□□□□□ -0.4
NEIL1-202ENST00000561643 FOXP1Q9H334 677 aaPredicted RBP12.55□□□□□ -0.4
NEIL1-202ENST00000561643 FANCLQ9NW38 375 aa12.55□□□□□ -0.4
NEIL1-202ENST00000561643 RAI14Q9P0K7 980 aa12.55□□□□□ -0.4
NEIL1-202ENST00000561643 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
NEIL1-202ENST00000561643 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
NEIL1-202ENST00000561643 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 AKAP17AQ02040 695 aaKnown RBP12.54□□□□□ -0.4
NEIL1-202ENST00000561643 GRIN1Q05586 938 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 HOMER1Q86YM7 354 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 NID2Q14112 1375 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 TOP1P11387 765 aaKnown RBP12.54□□□□□ -0.4
NEIL1-202ENST00000561643 PTPREP23469 700 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 POSTNQ15063 836 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 HSP90AA4PQ58FG1 418 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 SYT10Q6XYQ8 523 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 PDILTQ8N807 584 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 TSPYL1Q9H0U9 437 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 RSPH14Q9UHP6 348 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 FBXO2Q9UK22 296 aaPredicted RBP12.54□□□□□ -0.4
NEIL1-202ENST00000561643 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 NHSL1Q5SYE7 1610 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
NEIL1-202ENST00000561643 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
NEIL1-202ENST00000561643 KCNJ6P48051 423 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 ESR2Q92731 530 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
NEIL1-202ENST00000561643 ARAP2Q8WZ64 1704 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 ECM29Q5VYK3 1845 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 NTSR2O95665 410 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 SIK1P57059 783 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 PDE4BQ07343 736 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 ADGRA1Q86SQ6 560 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 MTA3Q9BTC8 594 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 CABP5Q9NP86 173 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 TNKSO95271 1327 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 DDB1Q16531 1140 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 VSTM4Q8IW00 320 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 SMARCE1Q969G3 411 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 C8orf37Q96NL8 207 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 CDC5LQ99459 802 aaKnown RBP12.53□□□□□ -0.4
NEIL1-202ENST00000561643 GNL3LQ9NVN8 582 aaKnown RBP12.53□□□□□ -0.4
NEIL1-202ENST00000561643 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
NEIL1-202ENST00000561643 TMEM232C9JQI7 657 aa12.52□□□□□ -0.4
NEIL1-202ENST00000561643 CCP110O43303 1012 aa12.52□□□□□ -0.4
NEIL1-202ENST00000561643 MYO1BO43795 1136 aa12.52□□□□□ -0.4
NEIL1-202ENST00000561643 BMP6P22004 513 aa12.52□□□□□ -0.4
NEIL1-202ENST00000561643 GYG1P46976 350 aa12.52□□□□□ -0.4
NEIL1-202ENST00000561643 MEX3CQ5U5Q3 659 aaKnown RBP12.52□□□□□ -0.4
NEIL1-202ENST00000561643 TMED8Q6PL24 325 aaPredicted RBP12.52□□□□□ -0.4
NEIL1-202ENST00000561643 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.52□□□□□ -0.4
NEIL1-202ENST00000561643 CHD4Q14839 1912 aa12.52□□□□□ -0.4
NEIL1-202ENST00000561643 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.4
NEIL1-202ENST00000561643 XBP1P17861 261 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 RCAN1P53805 252 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 MDM2Q00987 491 aaPredicted RBP12.52□□□□□ -0.41
NEIL1-202ENST00000561643 DOCK2Q92608 1830 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 RTL9Q8NET4 1388 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 GOLGA8FQ08AF8 430 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 GOLGA8DPQ0D2H9 430 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 ITPK1Q13572 414 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 ERCC6LQ2NKX8 1250 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 GRAMD1CQ8IYS0 662 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
NEIL1-202ENST00000561643 SMIM22K7EJ46 135 aa12.51□□□□□ -0.41
NEIL1-202ENST00000561643 BMS1Q14692 1282 aaKnown RBP12.51□□□□□ -0.41
NEIL1-202ENST00000561643 ELOA2Q8IYF1 753 aaPredicted RBP12.51□□□□□ -0.41
NEIL1-202ENST00000561643 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
NEIL1-202ENST00000561643 RNF26Q9BY78 433 aaPredicted RBP12.51□□□□□ -0.41
NEIL1-202ENST00000561643 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
NEIL1-202ENST00000561643 NFE2L3Q9Y4A8 694 aa12.51□□□□□ -0.41
NEIL1-202ENST00000561643 SRPRBQ9Y5M8 271 aaKnown RBP12.51□□□□□ -0.41
NEIL1-202ENST00000561643 COL14A1Q05707 1796 aaKnown RBP12.51□□□□□ -0.41
NEIL1-202ENST00000561643 ANKRD18AQ8IVF6 992 aa12.51□□□□□ -0.41
NEIL1-202ENST00000561643 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
NEIL1-202ENST00000561643 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
NEIL1-202ENST00000561643 hCG_1642624A0A1W2PR95 340 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 C10orf67Q8IYJ2 551 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 TRMT44Q8IYL2 757 aaKnown RBP12.5□□□□□ -0.41
NEIL1-202ENST00000561643 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
NEIL1-202ENST00000561643 LRRN4CLQ8ND94 238 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms