RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TRIM34Q9BYJ4 488 aa24.94■■□□□ 1.58
TPM1-232ENST00000561425 PUS7LQ9H0K6 701 aaKnown RBP24.94■■□□□ 1.58
TPM1-232ENST00000561425 CPA4Q9UI42 421 aa24.94■■□□□ 1.58
TPM1-232ENST00000561425 PTPRFP10586 1907 aa24.94■■□□□ 1.58
TPM1-232ENST00000561425 MYH1P12882 1939 aa24.93■■□□□ 1.58
TPM1-232ENST00000561425 PRKAB2O43741 272 aa24.93■■□□□ 1.58
TPM1-232ENST00000561425 GNRH1P01148 92 aa24.93■■□□□ 1.58
TPM1-232ENST00000561425 SHMT1P34896 483 aa24.93■■□□□ 1.58
TPM1-232ENST00000561425 BACE1P56817 501 aa24.93■■□□□ 1.58
TPM1-232ENST00000561425 SLC4A8Q2Y0W8 1093 aa24.93■■□□□ 1.58
TPM1-232ENST00000561425 MCM9Q9NXL9 1143 aa24.93■■□□□ 1.58
TPM1-232ENST00000561425 C19orf81C9J6K1 198 aa24.92■■□□□ 1.58
TPM1-232ENST00000561425 GLRX3O76003 335 aaKnown RBP24.92■■□□□ 1.58
TPM1-232ENST00000561425 GDF11O95390 407 aa24.92■■□□□ 1.58
TPM1-232ENST00000561425 POLR3DP05423 398 aaPredicted RBP24.92■■□□□ 1.58
TPM1-232ENST00000561425 TREML2Q5T2D2 321 aa24.92■■□□□ 1.58
TPM1-232ENST00000561425 ARHGAP39Q9C0H5 1083 aa24.92■■□□□ 1.58
TPM1-232ENST00000561425 ERC2O15083 957 aa24.91■■□□□ 1.58
TPM1-232ENST00000561425 CTGFP29279 349 aa24.91■■□□□ 1.58
TPM1-232ENST00000561425 HMGCS2P54868 508 aa24.91■■□□□ 1.58
TPM1-232ENST00000561425 EVX2Q03828 476 aa24.91■■□□□ 1.58
TPM1-232ENST00000561425 STAP2Q9UGK3 403 aa24.91■■□□□ 1.58
TPM1-232ENST00000561425 GH2P01242 217 aa24.9■■□□□ 1.58
TPM1-232ENST00000561425 ZFYP08048 801 aaPredicted RBP24.9■■□□□ 1.58
TPM1-232ENST00000561425 CERKLQ49MI3 558 aaPredicted RBP24.9■■□□□ 1.58
TPM1-232ENST00000561425 ANKRD45Q5TZF3 282 aa24.9■■□□□ 1.58
TPM1-232ENST00000561425 SMC5Q8IY18 1101 aa24.9■■□□□ 1.58
TPM1-232ENST00000561425 EXOC6Q8TAG9 804 aa24.9■■□□□ 1.58
TPM1-232ENST00000561425 STRBPQ96SI9 672 aaKnown RBP24.9■■□□□ 1.58
TPM1-232ENST00000561425 ATAD5Q96QE3 1844 aa24.9■■□□□ 1.58
TPM1-232ENST00000561425 RNF113AO15541 343 aaKnown RBP24.89■■□□□ 1.58
TPM1-232ENST00000561425 MX1P20591 662 aa24.89■■□□□ 1.58
TPM1-232ENST00000561425 HOXA7P31268 230 aaPredicted RBP24.89■■□□□ 1.58
TPM1-232ENST00000561425 KIF22Q14807 665 aa24.89■■□□□ 1.58
TPM1-232ENST00000561425 C12orf60Q5U649 245 aa24.89■■□□□ 1.58
TPM1-232ENST00000561425 APPBP2Q92624 585 aa24.89■■□□□ 1.58
TPM1-232ENST00000561425 OSBP2Q969R2 916 aa24.89■■□□□ 1.58
TPM1-232ENST00000561425 USP17L10C9JJH3 530 aa24.88■■□□□ 1.57
TPM1-232ENST00000561425 CYP2D6P10635 497 aa24.88■■□□□ 1.57
TPM1-232ENST00000561425 GUCY1A2P33402 732 aa24.88■■□□□ 1.57
TPM1-232ENST00000561425 PRMT2P55345 433 aa24.88■■□□□ 1.57
TPM1-232ENST00000561425 MTMR2Q13614 643 aa24.88■■□□□ 1.57
TPM1-232ENST00000561425 ARMC5Q96C12 935 aa24.88■■□□□ 1.57
TPM1-232ENST00000561425 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
TPM1-232ENST00000561425 LOC285556D6RIA3 1793 aa24.88■■□□□ 1.57
TPM1-232ENST00000561425 ABCB5Q2M3G0 1257 aa24.87■■□□□ 1.57
TPM1-232ENST00000561425 TRIM47Q96LD4 638 aa24.87■■□□□ 1.57
TPM1-232ENST00000561425 RWDD1Q9H446 243 aaPredicted RBP24.87■■□□□ 1.57
TPM1-232ENST00000561425 SWAP70Q9UH65 585 aa24.87■■□□□ 1.57
TPM1-232ENST00000561425 PNMA3Q9UL41 463 aa24.87■■□□□ 1.57
TPM1-232ENST00000561425 PSMC4P43686 418 aa24.86■■□□□ 1.57
TPM1-232ENST00000561425 PABPC4Q13310 644 aaKnown RBP eCLIP24.86■■□□□ 1.57
TPM1-232ENST00000561425 GIMAP6Q6P9H5 292 aa24.86■■□□□ 1.57
TPM1-232ENST00000561425 C12orf42Q96LP6 360 aa24.86■■□□□ 1.57
TPM1-232ENST00000561425 EMILIN3Q9NT22 766 aa24.86■■□□□ 1.57
TPM1-232ENST00000561425 SLC4A4Q9Y6R1 1079 aa24.86■■□□□ 1.57
TPM1-232ENST00000561425 MYH7P12883 1935 aa24.85■■□□□ 1.57
TPM1-232ENST00000561425 GSG1L2A8MUP6 293 aa24.85■■□□□ 1.57
TPM1-232ENST00000561425 USP17L12C9JPN9 530 aa24.85■■□□□ 1.57
TPM1-232ENST00000561425 USP17L21D6R901 530 aa24.85■■□□□ 1.57
TPM1-232ENST00000561425 IGHDP01880 384 aa24.85■■□□□ 1.57
TPM1-232ENST00000561425 CTR9Q6PD62 1173 aa24.85■■□□□ 1.57
TPM1-232ENST00000561425 ASCC2Q9H1I8 757 aaPredicted RBP24.85■■□□□ 1.57
TPM1-232ENST00000561425 PTCH2Q9Y6C5 1203 aa24.85■■□□□ 1.57
TPM1-232ENST00000561425 NAV1Q8NEY1 1877 aa24.85■■□□□ 1.57
TPM1-232ENST00000561425 SMIM22K7EJ46 135 aa24.84■■□□□ 1.57
TPM1-232ENST00000561425 GCLCP48506 637 aaPredicted RBP24.84■■□□□ 1.57
TPM1-232ENST00000561425 PDE1AP54750 535 aa24.84■■□□□ 1.57
TPM1-232ENST00000561425 LRRFIP1Q32MZ4 808 aaKnown RBP24.84■■□□□ 1.57
TPM1-232ENST00000561425 SBK1Q52WX2 424 aa24.84■■□□□ 1.57
TPM1-232ENST00000561425 USP17L2Q6R6M4 530 aa24.84■■□□□ 1.57
TPM1-232ENST00000561425 KIAA1683Q9H0B3 1180 aa24.84■■□□□ 1.57
TPM1-232ENST00000561425 CABP5Q9NP86 173 aa24.84■■□□□ 1.57
TPM1-232ENST00000561425 TMOD4Q9NZQ9 345 aa24.84■■□□□ 1.57
TPM1-232ENST00000561425 SRRDQ9UH36 339 aa24.84■■□□□ 1.57
TPM1-232ENST00000561425 OSBPP22059 807 aa24.83■■□□□ 1.57
TPM1-232ENST00000561425 SLC44A5Q8NCS7 719 aa24.83■■□□□ 1.57
TPM1-232ENST00000561425 SMCR8Q8TEV9 937 aaPredicted RBP24.83■■□□□ 1.57
TPM1-232ENST00000561425 DYNLL2Q96FJ2 89 aa24.83■■□□□ 1.57
TPM1-232ENST00000561425 HTTP42858 3142 aa24.83■■□□□ 1.56
TPM1-232ENST00000561425 CYP2D7A0A087X1C5 515 aa24.82■■□□□ 1.56
TPM1-232ENST00000561425 HOXD10P28358 340 aa24.82■■□□□ 1.56
TPM1-232ENST00000561425 SOX10P56693 466 aa24.82■■□□□ 1.56
TPM1-232ENST00000561425 FAM110CQ1W6H9 321 aa24.82■■□□□ 1.56
TPM1-232ENST00000561425 C16orf86Q6ZW13 317 aa24.82■■□□□ 1.56
TPM1-232ENST00000561425 ZBTB47Q9UFB7 747 aaPredicted RBP24.82■■□□□ 1.56
TPM1-232ENST00000561425 GPAA1O43292 621 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 CDK8P49336 464 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 FCGRTP55899 365 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 SEPT2Q15019 361 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 RAB3GAP1Q15042 981 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 ZMYM1Q5SVZ6 1142 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 TICAM2Q86XR7 235 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 ACER1Q8TDN7 264 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 DDRGK1Q96HY6 314 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 CCDC17Q96LX7 622 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 MORF4L1Q9UBU8 362 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 ZSWIM8A7E2V4 1837 aa24.81■■□□□ 1.56
TPM1-232ENST00000561425 M0R2C6 588 aa24.8■■□□□ 1.56
TPM1-232ENST00000561425 FMNL1O95466 1100 aaPredicted RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms