RNA–Protein interactions for RNA: ENST00000561410.5

AP3S2-215, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-215ENST00000561410 LTBP3Q9NS15 1303 aa16.08■□□□□ 0.16
AP3S2-215ENST00000561410 NFKBIEO00221 500 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
AP3S2-215ENST00000561410 TRIM22Q8IYM9 498 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 FANCBQ8NB91 859 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 WASF1Q92558 559 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 IDI2Q9BXS1 227 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 DHX36Q9H2U1 1008 aaKnown RBP16.07■□□□□ 0.16
AP3S2-215ENST00000561410 KAT14Q9H8E8 782 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 DDX4Q9NQI0 724 aaKnown RBP16.07■□□□□ 0.16
AP3S2-215ENST00000561410 TCP11L1Q9NUJ3 509 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 SWAP70Q9UH65 585 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 NID2Q14112 1375 aa16.07■□□□□ 0.16
AP3S2-215ENST00000561410 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
AP3S2-215ENST00000561410 RASA1P20936 1047 aa16.06■□□□□ 0.16
AP3S2-215ENST00000561410 ADD1P35611 737 aaKnown RBP16.06■□□□□ 0.16
AP3S2-215ENST00000561410 FOSBP53539 338 aa16.06■□□□□ 0.16
AP3S2-215ENST00000561410 CXCL9Q07325 125 aa16.06■□□□□ 0.16
AP3S2-215ENST00000561410 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
AP3S2-215ENST00000561410 DGKHQ86XP1 1220 aa16.06■□□□□ 0.16
AP3S2-215ENST00000561410 ZSCAN29Q8IWY8 852 aaPredicted RBP16.06■□□□□ 0.16
AP3S2-215ENST00000561410 CRACR2BQ8N4Y2 399 aaPredicted RBP16.06■□□□□ 0.16
AP3S2-215ENST00000561410 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
AP3S2-215ENST00000561410 C8orf76Q96K31 380 aa16.06■□□□□ 0.16
AP3S2-215ENST00000561410 GMLQ99445 158 aa16.06■□□□□ 0.16
AP3S2-215ENST00000561410 RBM28Q9NW13 759 aaKnown RBP16.06■□□□□ 0.16
AP3S2-215ENST00000561410 SERPINB13Q9UIV8 391 aa16.06■□□□□ 0.16
AP3S2-215ENST00000561410 NMT2O60551 498 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 ENTPD3O75355 529 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 NCLP19338 710 aaKnown RBP16.05■□□□□ 0.16
AP3S2-215ENST00000561410 MMP14P50281 582 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 EIF6P56537 245 aaKnown RBP16.05■□□□□ 0.16
AP3S2-215ENST00000561410 TCP10Q12799 353 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 NFIAQ12857 509 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 TRIM29Q14134 588 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 CSPP1Q1MSJ5 1256 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
AP3S2-215ENST00000561410 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
AP3S2-215ENST00000561410 CDC37L1Q7L3B6 337 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 CTCFLQ8NI51 663 aaPredicted RBP16.05■□□□□ 0.16
AP3S2-215ENST00000561410 TDRD3Q9H7E2 651 aaKnown RBP16.05■□□□□ 0.16
AP3S2-215ENST00000561410 TAOK2Q9UL54 1235 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 ZBTB12Q9Y330 459 aaPredicted RBP16.05■□□□□ 0.16
AP3S2-215ENST00000561410 PCDHAC2Q9Y5I4 1007 aa16.05■□□□□ 0.16
AP3S2-215ENST00000561410 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 MYO1BO43795 1136 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 TRAK2O60296 914 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 PPFIA3O75145 1194 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 IFNAR1P17181 557 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 RPS12P25398 132 aaKnown RBP16.04■□□□□ 0.16
AP3S2-215ENST00000561410 CDC27P30260 824 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 KIF5BP33176 963 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 CACNB3P54284 484 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 AKAP17AQ02040 695 aaKnown RBP16.04■□□□□ 0.16
AP3S2-215ENST00000561410 RASSF7Q02833 373 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 NEDD1Q8NHV4 660 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 ANKS1AQ92625 1134 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 SLC26A6Q9BXS9 759 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 EHD4Q9H223 541 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 ZSCAN16Q9H4T2 348 aaPredicted RBP16.04■□□□□ 0.16
AP3S2-215ENST00000561410 COL4A5P29400 1685 aa16.04■□□□□ 0.16
AP3S2-215ENST00000561410 DDX60LQ5H9U9 1706 aaKnown RBP16.03■□□□□ 0.16
AP3S2-215ENST00000561410 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
AP3S2-215ENST00000561410 FDPSP14324 419 aaKnown RBP16.03■□□□□ 0.16
AP3S2-215ENST00000561410 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
AP3S2-215ENST00000561410 FERMT3Q86UX7 667 aa16.03■□□□□ 0.16
AP3S2-215ENST00000561410 RGS22Q8NE09 1264 aa16.03■□□□□ 0.16
AP3S2-215ENST00000561410 PRMT6Q96LA8 375 aaPredicted RBP16.03■□□□□ 0.16
AP3S2-215ENST00000561410 ALG1Q9BT22 464 aa16.03■□□□□ 0.16
AP3S2-215ENST00000561410 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
AP3S2-215ENST00000561410 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
AP3S2-215ENST00000561410 FAM198AQ9UFP1 575 aa16.03■□□□□ 0.16
AP3S2-215ENST00000561410 STX8Q9UNK0 236 aa16.03■□□□□ 0.16
AP3S2-215ENST00000561410 PRPF40AO75400 957 aaKnown RBP16.02■□□□□ 0.16
AP3S2-215ENST00000561410 GABPAQ06546 454 aa16.02■□□□□ 0.16
AP3S2-215ENST00000561410 ARHGAP27Q6ZUM4 889 aa16.02■□□□□ 0.16
AP3S2-215ENST00000561410 PHKBQ93100 1093 aa16.02■□□□□ 0.16
AP3S2-215ENST00000561410 FHDC1Q9C0D6 1143 aaPredicted RBP16.02■□□□□ 0.16
AP3S2-215ENST00000561410 IL17RBQ9NRM6 502 aa16.02■□□□□ 0.16
AP3S2-215ENST00000561410 ZNF70Q9UC06 446 aaPredicted RBP16.02■□□□□ 0.16
AP3S2-215ENST00000561410 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
AP3S2-215ENST00000561410 ADAMTSL1Q8N6G6 1762 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 KRT85P78386 507 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 TROAPQ12815 778 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 NTRK3Q16288 839 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 RCSD1Q6JBY9 416 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 FOXP4Q8IVH2 680 aaPredicted RBP16.01■□□□□ 0.15
AP3S2-215ENST00000561410 ZFPM1Q8IX07 1006 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 MTMR14Q8NCE2 650 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 PNMA1Q8ND90 353 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 CCDC17Q96LX7 622 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 GJA3Q9Y6H8 435 aa16.01■□□□□ 0.15
AP3S2-215ENST00000561410 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
AP3S2-215ENST00000561410 CLRN2A0PK11 232 aa16■□□□□ 0.15
AP3S2-215ENST00000561410 TCP10L2B9ZVM9 353 aa16■□□□□ 0.15
AP3S2-215ENST00000561410 MPHOSPH10O00566 681 aaKnown RBP16■□□□□ 0.15
AP3S2-215ENST00000561410 DEXIO95424 95 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms