RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 IFNL3Q8IZI9 196 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 MIGA1Q8NAN2 632 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 AGBL3Q8NEM8 1001 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 ZNF333Q96JL9 665 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 ZSCAN31Q96LW9 406 aaPredicted RBP8.89□□□□□ -0.99
TPM1-231ENST00000561395 COA1Q9GZY4 146 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 NBPF3Q9H094 633 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
TPM1-231ENST00000561395 SH2B1Q9NRF2 756 aaPredicted RBP8.89□□□□□ -0.99
TPM1-231ENST00000561395 JAG2Q9Y219 1238 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 BAZ2AQ9UIF9 1905 aaKnown RBP8.89□□□□□ -0.99
TPM1-231ENST00000561395 FOCADQ5VW36 1801 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 DDX60LQ5H9U9 1706 aaKnown RBP8.88□□□□□ -0.99
TPM1-231ENST00000561395 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 MGAMO43451 1857 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 MANSC4A6NHS7 340 aaPredicted RBP8.88□□□□□ -0.99
TPM1-231ENST00000561395 IGF2BP3O00425 579 aaKnown RBP eCLIP8.88□□□□□ -0.99
TPM1-231ENST00000561395 ZNF213O14771 459 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 PRKAB2O43741 272 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 LARGE1O95461 756 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 USP17L8P0C7I0 530 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 DYNLL1P63167 89 aaKnown RBP8.88□□□□□ -0.99
TPM1-231ENST00000561395 GSTO1P78417 241 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 EXOSC10Q01780 885 aaKnown RBP8.88□□□□□ -0.99
TPM1-231ENST00000561395 PRKG1Q13976 671 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 DHX32Q7L7V1 743 aaKnown RBP8.88□□□□□ -0.99
TPM1-231ENST00000561395 ARMC9Q7Z3E5 817 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 DZIP1Q86YF9 867 aaKnown RBP8.88□□□□□ -0.99
TPM1-231ENST00000561395 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 TBC1D22AQ8WUA7 517 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 TCEANC2Q96MN5 208 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 NACAP1Q9BZK3 213 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 ZC3H12CQ9C0D7 883 aaKnown RBP8.88□□□□□ -0.99
TPM1-231ENST00000561395 NAPBQ9H115 298 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 EFCC1Q9HA90 598 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 FARP1Q9Y4F1 1045 aaPredicted RBP8.88□□□□□ -0.99
TPM1-231ENST00000561395 SLC4A4Q9Y6R1 1079 aa8.88□□□□□ -0.99
TPM1-231ENST00000561395 WDR19Q8NEZ3 1342 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 TDO2P48775 406 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 CAP1Q01518 475 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 RAB3GAP1Q15042 981 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 GRIK5Q16478 980 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 ME3Q16798 604 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 SLC4A8Q2Y0W8 1093 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 NBPF9Q3BBW0 867 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 SLC9C1Q4G0N8 1177 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 GIMAP6Q6P9H5 292 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 Q6ZUG5 572 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 MB21D2Q8IYB1 491 aaPredicted RBP8.87□□□□□ -0.99
TPM1-231ENST00000561395 FBXL16Q8N461 479 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 GMLQ99445 158 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 LARP6Q9BRS8 491 aaKnown RBP8.87□□□□□ -0.99
TPM1-231ENST00000561395 AGXT2Q9BYV1 514 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 TPCN1Q9ULQ1 816 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
TPM1-231ENST00000561395 SSC5DA1L4H1 1573 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 MROH7-TTC4A0A0A0MT08 1334 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 INHBEP58166 350 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 ANTXR2P58335 489 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 ST3GAL1Q11201 340 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 CRHR2Q13324 411 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 NFKBIBQ15653 356 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 MFSD14BQ5SR56 506 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 LDLRAD1Q5T700 205 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 RALYLQ86SE5 291 aaKnown RBP8.86□□□□□ -0.99
TPM1-231ENST00000561395 CERS3Q8IU89 383 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 CCDC83Q8IWF9 413 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 NCOA7Q8NI08 942 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 SDR42E1Q8WUS8 393 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 STAG1Q8WVM7 1258 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 ANP32EQ9BTT0 268 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 LRRC2Q9BYS8 371 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 CRNKL1Q9BZJ0 848 aaKnown RBP8.86□□□□□ -0.99
TPM1-231ENST00000561395 AATFQ9NY61 560 aaKnown RBP eCLIP8.86□□□□□ -0.99
TPM1-231ENST00000561395 ANAPC4Q9UJX5 808 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 ANGEL1Q9UNK9 670 aaKnown RBP8.86□□□□□ -0.99
TPM1-231ENST00000561395 SUGT1Q9Y2Z0 365 aa8.86□□□□□ -0.99
TPM1-231ENST00000561395 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.86□□□□□ -0.99
TPM1-231ENST00000561395 NEDD4P46934 1319 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 WNT10BO00744 389 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 PRC1O43663 620 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
TPM1-231ENST00000561395 LDHCP07864 332 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 ZBTB48P10074 688 aaPredicted RBP8.85□□□□□ -0.99
TPM1-231ENST00000561395 MCM5P33992 734 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 GTF2IP78347 998 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 NUCB2P80303 420 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 SP3Q02447 781 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 TRDNQ13061 729 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 DIXDC1Q155Q3 683 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 NBPF11Q86T75 865 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 BRF1Q92994 677 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 FAM212AQ96EL1 285 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 WNK4Q96J92 1243 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 PRO3102Q9H379 93 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 CNNM2Q9H8M5 875 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 ATP8A2Q9NTI2 1148 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 FZD1Q9UP38 647 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 PTCH2Q9Y6C5 1203 aa8.85□□□□□ -0.99
TPM1-231ENST00000561395 GAKO14976 1311 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms