RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PLEKHM2Q8IWE5 1019 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 SLC44A5Q8NCS7 719 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 DNAJC18Q9H819 358 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 CABP5Q9NP86 173 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
HERC1-212ENST00000561348 SALL3Q9BXA9 1300 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 BAZ2AQ9UIF9 1905 aaKnown RBP12.13□□□□□ -0.47
HERC1-212ENST00000561348 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 BTBD19C9JJ37 291 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 GPR25O00155 361 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 GH2P01242 217 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 ASNSP08243 561 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 MAP3K10Q02779 954 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 DGKZQ13574 1117 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 ABCB5Q2M3G0 1257 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 ZNF296Q8WUU4 475 aaPredicted RBP12.13□□□□□ -0.47
HERC1-212ENST00000561348 STRBPQ96SI9 672 aaKnown RBP12.13□□□□□ -0.47
HERC1-212ENST00000561348 FEZ1Q99689 392 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 AS3MTQ9HBK9 375 aa12.13□□□□□ -0.47
HERC1-212ENST00000561348 COL2A1P02458 1487 aaPredicted RBP12.13□□□□□ -0.47
HERC1-212ENST00000561348 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 SMIM22K7EJ46 135 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 PDHXO00330 501 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 RAD21O60216 631 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 FKTNO75072 461 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 HMGCS2P54868 508 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 JAG1P78504 1218 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 ZNF280CQ8ND82 737 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
HERC1-212ENST00000561348 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
HERC1-212ENST00000561348 CXCL11O14625 94 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 CYP2C8P10632 490 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 PDE4AP27815 886 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 NMIQ13287 307 aaPredicted RBP12.11□□□□□ -0.47
HERC1-212ENST00000561348 MTMR2Q13614 643 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 ZMYM1Q5SVZ6 1142 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 FASTKD5Q7L8L6 764 aaKnown RBP12.11□□□□□ -0.47
HERC1-212ENST00000561348 FAM227BQ96M60 508 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 TMOD4Q9NZQ9 345 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 CPA4Q9UI42 421 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 KCNH4Q9UQ05 1017 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
HERC1-212ENST00000561348 GSG1L2A8MUP6 293 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 PATL2C9JE40 543 aaKnown RBP12.1□□□□□ -0.47
HERC1-212ENST00000561348 GNAT2P19087 354 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 SHMT1P34896 483 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 SEPT2Q15019 361 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 CWC27Q6UX04 472 aaKnown RBP12.1□□□□□ -0.47
HERC1-212ENST00000561348 IFNL3Q8IZI9 196 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 CD99L2Q8TCZ2 262 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 SMCR8Q8TEV9 937 aaPredicted RBP12.1□□□□□ -0.47
HERC1-212ENST00000561348 NAPBQ9H115 298 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 EHD4Q9H223 541 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 MKNK2Q9HBH9 465 aa12.1□□□□□ -0.47
HERC1-212ENST00000561348 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
HERC1-212ENST00000561348 A0A0D9SFI3 127 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 A0A0G2JLL6 359 aaPredicted RBP12.09□□□□□ -0.47
HERC1-212ENST00000561348 PRDM1O75626 825 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 CDK8P49336 464 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 SP3Q02447 781 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 PRRT2Q7Z6L0 340 aaPredicted RBP12.09□□□□□ -0.47
HERC1-212ENST00000561348 ANKRD23Q86SG2 305 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 SKAP1Q86WV1 359 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 MCOLN1Q9GZU1 580 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 TOMM22Q9NS69 142 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 SWAP70Q9UH65 585 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 TRIM17Q9Y577 477 aa12.09□□□□□ -0.47
HERC1-212ENST00000561348 USP17L10C9JJH3 530 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 AKR1B1P15121 316 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 SDSP20132 328 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 KIF22Q14807 665 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 MCMDC2Q4G0Z9 681 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 VPS53Q5VIR6 699 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 GPAT2Q6NUI2 795 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
HERC1-212ENST00000561348 CLEC10AQ8IUN9 316 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 PARK7Q99497 189 aaKnown RBP12.08□□□□□ -0.48
HERC1-212ENST00000561348 EPB41L4AQ9HCS5 686 aaPredicted RBP12.08□□□□□ -0.48
HERC1-212ENST00000561348 HELLSQ9NRZ9 838 aa12.08□□□□□ -0.48
HERC1-212ENST00000561348 MYH8P13535 1937 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 CCDC85CA6NKD9 419 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 SLC3A2P08195 630 aaKnown RBP12.07□□□□□ -0.48
HERC1-212ENST00000561348 OSBPP22059 807 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 BACE1P56817 501 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 IRX3P78415 501 aaPredicted RBP12.07□□□□□ -0.48
HERC1-212ENST00000561348 CTDSPL2Q05D32 466 aa12.07□□□□□ -0.48
HERC1-212ENST00000561348 MOGSQ13724 837 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms