RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 IDI2Q9BXS1 227 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 ZNF341Q9BYN7 854 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 SNRKQ9NRH2 765 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 ZNF112Q9UJU3 913 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 DBNLQ9UJU6 430 aaKnown RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 HPS5Q9UPZ3 1129 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 NOP58Q9Y2X3 529 aaKnown RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 BAZ2AQ9UIF9 1905 aaKnown RBP9.11□□□□□ -0.95
ZEB1-223ENST00000561304 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 PHF20L1A8MW92 1017 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 RGS19P49795 217 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 GTF2A2P52657 109 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 PPIL2Q13356 520 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 OS9Q13438 667 aaPredicted RBP9.11□□□□□ -0.95
ZEB1-223ENST00000561304 DCAF15Q66K64 600 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 SPTY2D1Q68D10 685 aaPredicted RBP9.11□□□□□ -0.95
ZEB1-223ENST00000561304 ADGRA1Q86SQ6 560 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 ERO1BQ86YB8 467 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 CD99L2Q8TCZ2 262 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 EAF2Q96CJ1 260 aaPredicted RBP9.11□□□□□ -0.95
ZEB1-223ENST00000561304 GPR108Q9NPR9 543 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 EXOC6BQ9Y2D4 811 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 NDUFB9Q9Y6M9 179 aa9.11□□□□□ -0.95
ZEB1-223ENST00000561304 COL2A1P02458 1487 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-223ENST00000561304 FAM196BA6NMK8 535 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 BTBD19C9JJ37 291 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 BHMG1C9JSJ3 638 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-223ENST00000561304 ENTPD3O75355 529 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 CYP2E1P05181 493 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-223ENST00000561304 MOGSQ13724 837 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 TTC39AQ5SRH9 613 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 NOL9Q5SY16 702 aaKnown RBP9.1□□□□□ -0.95
ZEB1-223ENST00000561304 C20orf194Q5TEA3 1177 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 OTOP1Q7RTM1 612 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-223ENST00000561304 NBPF3Q9H094 633 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 CCDC8Q9H0W5 538 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-223ENST00000561304 PIH1D3Q9NQM4 214 aaKnown RBP9.1□□□□□ -0.95
ZEB1-223ENST00000561304 RAI14Q9P0K7 980 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 RABGEF1Q9UJ41 708 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
ZEB1-223ENST00000561304 UQCRFS1P1P0C7P4 283 aa9.09□□□□□ -0.95
ZEB1-223ENST00000561304 ZAP70P43403 619 aa9.09□□□□□ -0.95
ZEB1-223ENST00000561304 PPATQ06203 517 aa9.09□□□□□ -0.95
ZEB1-223ENST00000561304 TAF1CQ15572 869 aaPredicted RBP9.09□□□□□ -0.95
ZEB1-223ENST00000561304 FBXO46Q6PJ61 603 aaPredicted RBP9.09□□□□□ -0.95
ZEB1-223ENST00000561304 CCDC84Q86UT8 332 aaPredicted RBP9.09□□□□□ -0.95
ZEB1-223ENST00000561304 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.95
ZEB1-223ENST00000561304 SH3RF3Q8TEJ3 882 aaPredicted RBP9.09□□□□□ -0.95
ZEB1-223ENST00000561304 HOOK2Q96ED9 719 aa9.09□□□□□ -0.95
ZEB1-223ENST00000561304 KCNH4Q9UQ05 1017 aa9.09□□□□□ -0.95
ZEB1-223ENST00000561304 TRIM17Q9Y577 477 aa9.09□□□□□ -0.95
ZEB1-223ENST00000561304 ADGRA2Q96PE1 1338 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 PLXNB2O15031 1838 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 CETPP11597 493 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 SP3Q02447 781 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 MAP3K10Q02779 954 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 SNAPC2Q13487 334 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 RRP1BQ14684 758 aaKnown RBP9.08□□□□□ -0.96
ZEB1-223ENST00000561304 PKN2Q16513 984 aaKnown RBP9.08□□□□□ -0.96
ZEB1-223ENST00000561304 SMYD5Q6GMV2 418 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 OTUD7BQ6GQQ9 843 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 ZSCAN29Q8IWY8 852 aaPredicted RBP9.08□□□□□ -0.96
ZEB1-223ENST00000561304 SLF2Q8IX21 1173 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 ARHGAP39Q9C0H5 1083 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 OSBPL5Q9H0X9 879 aaPredicted RBP9.08□□□□□ -0.96
ZEB1-223ENST00000561304 ZBTB40Q9NUA8 1239 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 AATFQ9NY61 560 aaKnown RBP eCLIP9.08□□□□□ -0.96
ZEB1-223ENST00000561304 LRP2BPQ9P2M1 347 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 RCAN3Q9UKA8 241 aa9.08□□□□□ -0.96
ZEB1-223ENST00000561304 TRIM6-TRIM34B2RNG4 842 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 PTPRAP18433 802 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 CTGFP29279 349 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 MLLT1Q03111 559 aaPredicted RBP9.07□□□□□ -0.96
ZEB1-223ENST00000561304 PROX2Q3B8N5 592 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 CCDC158Q5M9N0 1113 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 NAA16Q6N069 864 aaPredicted RBP9.07□□□□□ -0.96
ZEB1-223ENST00000561304 TEX11Q8IYF3 940 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 ERO1AQ96HE7 468 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 ZNF512BQ96KM6 892 aaPredicted RBP9.07□□□□□ -0.96
ZEB1-223ENST00000561304 ANTXR1Q9H6X2 564 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 IL1RAPL2Q9NP60 686 aa9.07□□□□□ -0.96
ZEB1-223ENST00000561304 KIAA0100Q14667 2235 aaKnown RBP9.06□□□□□ -0.96
ZEB1-223ENST00000561304 PDE4DIPQ5VU43 2346 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 APBB1O00213 710 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 LDHCP07864 332 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 PRKCSHP14314 528 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-223ENST00000561304 DYNLL1P63167 89 aaKnown RBP9.06□□□□□ -0.96
ZEB1-223ENST00000561304 GSTO1P78417 241 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 SHROOM1Q2M3G4 852 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-223ENST00000561304 GPAT2Q6NUI2 795 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 AACSQ86V21 672 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 RHPN1Q8TCX5 695 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 DNAJC18Q9H819 358 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 ZFYVE28Q9HCC9 887 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 RBM27Q9P2N5 1060 aaKnown RBP9.06□□□□□ -0.96
ZEB1-223ENST00000561304 CPA4Q9UI42 421 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 DDX19BQ9UMR2 479 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms