RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 ABT1Q9ULW3 272 aaKnown RBP12.22□□□□□ -0.45
LRRC28-221ENST00000561276 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
LRRC28-221ENST00000561276 DOCK1Q14185 1865 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 UNCXA6NJT0 531 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 CAP2P40123 477 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 PDE4BQ07343 736 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 MFSD6Q6ZSS7 791 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 SLC10A4Q96EP9 437 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 CLMNQ96JQ2 1002 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 USP26Q9BXU7 913 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 NBPF3Q9H094 633 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 TACC3Q9Y6A5 838 aa12.21□□□□□ -0.45
LRRC28-221ENST00000561276 ROBO3Q96MS0 1386 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 HAX1O00165 279 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 PRDM1O75626 825 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 SEC24BO95487 1268 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 CYP21A2P08686 494 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 FGRP09769 529 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 JAG1P78504 1218 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 VGLL4Q14135 290 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 DEFB115Q30KQ5 88 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 AKNAD1Q5T1N1 836 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
LRRC28-221ENST00000561276 CSADQ9Y600 493 aa12.2□□□□□ -0.46
LRRC28-221ENST00000561276 PHIPQ8WWQ0 1821 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
LRRC28-221ENST00000561276 GDF11O95390 407 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 HSPA6P17066 643 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 RASA1P20936 1047 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 ZNF157P51786 506 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-221ENST00000561276 HTRA3P83110 453 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 ABCB5Q2M3G0 1257 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 SHROOM1Q2M3G4 852 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-221ENST00000561276 RGMBQ6NW40 437 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 SCYL3Q8IZE3 742 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 HHIPL1Q96JK4 782 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 CCDC17Q96LX7 622 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 ELP3Q9H9T3 547 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 CABP5Q9NP86 173 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 TOMM22Q9NS69 142 aa12.19□□□□□ -0.46
LRRC28-221ENST00000561276 MPHOSPH10O00566 681 aaKnown RBP12.18□□□□□ -0.46
LRRC28-221ENST00000561276 SLC27A2O14975 620 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 EPB41L2O43491 1005 aaKnown RBP12.18□□□□□ -0.46
LRRC28-221ENST00000561276 GH2P01242 217 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 ASNSP08243 561 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 AKR1B1P15121 316 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 PTPRAP18433 802 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 TFAP4Q01664 338 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 FAM47AQ5JRC9 791 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 RRP12Q5JTH9 1297 aaKnown RBP12.18□□□□□ -0.46
LRRC28-221ENST00000561276 NOL9Q5SY16 702 aaKnown RBP12.18□□□□□ -0.46
LRRC28-221ENST00000561276 RNF20Q5VTR2 975 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 CREB3L3Q68CJ9 461 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 TBC1D10CQ8IV04 446 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 STAG1Q8WVM7 1258 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 RNF41Q9H4P4 317 aaPredicted RBP12.18□□□□□ -0.46
LRRC28-221ENST00000561276 PICK1Q9NRD5 415 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
LRRC28-221ENST00000561276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
LRRC28-221ENST00000561276 SNCAIPQ9Y6H5 919 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 TAF6LQ9Y6J9 622 aa12.18□□□□□ -0.46
LRRC28-221ENST00000561276 RASSF10A6NK89 507 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 E7EWF7 191 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 ORC4O43929 436 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 RANBP6O60518 1105 aaKnown RBP12.17□□□□□ -0.46
LRRC28-221ENST00000561276 PCP11498 1178 aaKnown RBP12.17□□□□□ -0.46
LRRC28-221ENST00000561276 HSPA4P34932 840 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 RAB3GAP1Q15042 981 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 ERO1BQ86YB8 467 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 KRT23Q9C075 422 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 GINM1Q9NU53 330 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 ZHX2Q9Y6X8 837 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 MYH4Q9Y623 1939 aa12.17□□□□□ -0.46
LRRC28-221ENST00000561276 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
LRRC28-221ENST00000561276 TSPY2A6NKD2 308 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 USP17L5A8MUK1 530 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 B4E1Z4 1266 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 TSPY3P0CV98 308 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 TSPY8P0CW00 308 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 GUCY1A2P33402 732 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 PPATQ06203 517 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 TRDNQ13061 729 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 SEPT2Q15019 361 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 TSGA10IPQ3SY00 556 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 CYP4F22Q6NT55 531 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 TMEM179Q6ZVK1 233 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
LRRC28-221ENST00000561276 CCDC84Q86UT8 332 aaPredicted RBP12.16□□□□□ -0.46
LRRC28-221ENST00000561276 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 CCDC102AQ96A19 550 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 OPTNQ96CV9 577 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 CNNM2Q9H8M5 875 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 ZSWIM5Q9P217 1185 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 ZBTB21Q9ULJ3 1066 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
LRRC28-221ENST00000561276 NEDD4P46934 1319 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms