RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 TRMT44Q8IYL2 757 aaKnown RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 BAZ2AQ9UIF9 1905 aaKnown RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 COL16A1Q07092 1604 aaPredicted RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 KIF2AO00139 706 aaPredicted RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 CBFA2T2O43439 604 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 SLU7O95391 586 aaKnown RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 KCNJ6P48051 423 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 SEC23AQ15436 765 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 ERO1AQ96HE7 468 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 WNK3Q9BYP7 1800 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 LOC102724428A0A0B4J2F2 783 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 PRDM1O75626 825 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 TOP1P11387 765 aaKnown RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 SIK1P57059 783 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 PARP10Q53GL7 1025 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 EARS2Q5JPH6 523 aaKnown RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 PKNOX2Q96KN3 472 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 CSRNP2Q9H175 543 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 RNF41Q9H4P4 317 aaPredicted RBP11.22□□□□□ -0.61
SNX22-206ENST00000560997 VPS54Q9P1Q0 977 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 MAGEB6P1A0A0J9YX57 407 aa11.21□□□□□ -0.61
SNX22-206ENST00000560997 NRDCO43847 1150 aa11.21□□□□□ -0.61
SNX22-206ENST00000560997 MED15Q96RN5 788 aa11.21□□□□□ -0.61
SNX22-206ENST00000560997 TMX1Q9H3N1 280 aa11.21□□□□□ -0.61
SNX22-206ENST00000560997 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 WNT7AO00755 349 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 FANCGO15287 622 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 ACTN4O43707 911 aaKnown RBP11.21□□□□□ -0.62
SNX22-206ENST00000560997 EVX2Q03828 476 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 FBXO38Q6PIJ6 1188 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 HOMER1Q86YM7 354 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 TMTC2Q8N394 836 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 FEZ1Q99689 392 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 L2HGDHQ9H9P8 463 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 NFE2L3Q9Y4A8 694 aa11.21□□□□□ -0.62
SNX22-206ENST00000560997 DMTNQ08495 405 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 PKN1Q16512 942 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 ENAHQ8N8S7 591 aaPredicted RBP11.2□□□□□ -0.62
SNX22-206ENST00000560997 RIOK1Q9BRS2 568 aaKnown RBP11.2□□□□□ -0.62
SNX22-206ENST00000560997 SRPRBQ9Y5M8 271 aaKnown RBP11.2□□□□□ -0.62
SNX22-206ENST00000560997 BAZ2BQ9UIF8 2168 aaKnown RBP11.2□□□□□ -0.62
SNX22-206ENST00000560997 RTL9Q8NET4 1388 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 A0A087X0B3 334 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 PLEKHA8P1O95397 391 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 SARSP49591 514 aaKnown RBP11.2□□□□□ -0.62
SNX22-206ENST00000560997 MORC3Q14149 939 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
SNX22-206ENST00000560997 NT5DC1Q5TFE4 455 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 TMEM139Q8IV31 216 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 ZNF397Q8NF99 534 aaPredicted RBP11.2□□□□□ -0.62
SNX22-206ENST00000560997 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 ESR2Q92731 530 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 OGFRQ9NZT2 677 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 DDX41Q9UJV9 622 aaKnown RBP11.2□□□□□ -0.62
SNX22-206ENST00000560997 CACNA1SQ13698 1873 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 ZNF804BA4D1E1 1349 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 LAMB2P55268 1798 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 DNAI1Q9UI46 699 aa11.2□□□□□ -0.62
SNX22-206ENST00000560997 ZNF18P17022 549 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 CASP1P29466 404 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 DHX8Q14562 1220 aaKnown RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 DDB1Q16531 1140 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 ERCC6LQ2NKX8 1250 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 ERFEQ4G0M1 354 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 CCDC93Q567U6 631 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 TRIM65Q6PJ69 517 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 REXO1L1PQ8IX06 675 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 ELOA2Q8IYF1 753 aaPredicted RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 EPSTI1Q96J88 318 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 MTA3Q9BTC8 594 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 RNF26Q9BY78 433 aaPredicted RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 SAMSN1Q9NSI8 373 aaKnown RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 HOOK1Q9UJC3 728 aaKnown RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 ANAPC4Q9UJX5 808 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 DUOX1Q9NRD9 1551 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 IGSF3O75054 1194 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 ETF1P62495 437 aaKnown RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 FUT2Q10981 343 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 DHX58Q96C10 678 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 ZSCAN10Q96SZ4 725 aaPredicted RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 RCAN1P53805 252 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 SMIM5Q71RC9 77 aa11.19□□□□□ -0.62
SNX22-206ENST00000560997 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
SNX22-206ENST00000560997 A0A1B0GUL6 1792 aa11.18□□□□□ -0.62
SNX22-206ENST00000560997 ADAMTS2O95450 1211 aa11.18□□□□□ -0.62
SNX22-206ENST00000560997 CDK11BP21127 795 aaKnown RBP11.18□□□□□ -0.62
SNX22-206ENST00000560997 ADKP55263 362 aaKnown RBP11.18□□□□□ -0.62
SNX22-206ENST00000560997 AKAP17AQ02040 695 aaKnown RBP11.18□□□□□ -0.62
SNX22-206ENST00000560997 TBX2Q13207 712 aaPredicted RBP11.18□□□□□ -0.62
SNX22-206ENST00000560997 MLKLQ8NB16 471 aa11.18□□□□□ -0.62
SNX22-206ENST00000560997 CDC5LQ99459 802 aaKnown RBP11.18□□□□□ -0.62
SNX22-206ENST00000560997 CEP131Q9UPN4 1083 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms