RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 PIN1Q13526 163 aaPredicted RBP7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 PPP2R5EQ16537 467 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 RNF180Q86T96 592 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 CEP120Q8N960 986 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 CCDC89Q8N998 374 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 RNF214Q8ND24 703 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 LRGUKQ96M69 825 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 KIF2CQ99661 725 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 ARHGAP9Q9BRR9 750 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 CDH19Q9H159 772 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 GGNBP2Q9H3C7 697 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 TTC12Q9H892 705 aaPredicted RBP7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 IPPQ9Y573 584 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 CEP83Q9Y592 693 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 RAD50Q92878 1312 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 A6NCN8 305 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 CD2BP2O95400 341 aaKnown RBP7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 POLR3DP05423 398 aaPredicted RBP7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 ADD2P35612 726 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 EIF4A3P38919 411 aaKnown RBP7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 KRT26Q7Z3Y9 468 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 NUDT16Q96DE0 195 aaKnown RBP7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 REC8O95072 547 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 ATP6V1AP38606 617 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 HALP42357 657 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 UVSSAQ2YD98 709 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 ALDH1L2Q3SY69 923 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 KIAA1524Q8TCG1 905 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 USP33Q8TEY7 942 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 SLC26A8Q96RN1 970 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 TSPY26PQ9H489 355 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 KLK14Q9P0G3 267 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 FNIP2Q9P278 1114 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 IP6K2Q9UHH9 426 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 TSR3Q9UJK0 312 aaKnown RBP7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 USP20Q9Y2K6 914 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 PPP1R12BO60237 982 aaPredicted RBP7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 GUCY2CP25092 1073 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 SSRP1Q08945 709 aaKnown RBP7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 TRIM14Q14142 442 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 TUBB8Q3ZCM7 444 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 XRRA1Q6P2D8 792 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 CPXCR1Q8N123 301 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 CLASRPQ8N2M8 674 aaKnown RBP7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 C14orf93Q9H972 538 aaKnown RBP7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 AGLP35573 1532 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 NEXMIFQ5QGS0 1516 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 KIF16BQ96L93 1317 aa7.83□□□□□ -1.16
TSPAN3-209ENST00000560715 CCDC172P0C7W6 258 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 TNFAIP3P21580 790 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 PTK2Q05397 1052 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 LMBRD2Q68DH5 695 aaPredicted RBP7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 EP400NLQ6ZTU2 488 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 MAATS1Q7Z4T9 603 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 EGFL6Q8IUX8 553 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 ALDH8A1Q9H2A2 487 aaPredicted RBP7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 SAGE1Q9NXZ1 904 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 RABGAP1Q9Y3P9 1069 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 ADGRB1O14514 1584 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 ERVK-7P63135 1459 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 TLR3O15455 904 aaKnown RBP7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 PDGFAP04085 211 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 CT47B1P0C2W7 299 aaPredicted RBP7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 MUM1L1Q5H9M0 696 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 TEX19Q8NA77 164 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 ERP27Q96DN0 273 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 KCNK17Q96T54 332 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 QRICH2Q9H0J4 1663 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 MYO5BQ9ULV0 1848 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 ASXL1Q8IXJ9 1541 aa7.82□□□□□ -1.16
TSPAN3-209ENST00000560715 GJB6O95452 261 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 CASQ1P31415 396 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 MAN1A1P33908 653 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 CNNM4Q6P4Q7 775 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 FAM184AQ8NB25 1140 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 NELL1Q92832 810 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 TARS2Q9BW92 718 aaKnown RBP7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 ANAPC4Q9UJX5 808 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 KNSTRNQ9Y448 316 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 ZFYVE9O95405 1425 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 DDAH1O94760 285 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 MBD3O95983 291 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 ZAP70P43403 619 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 WDR43Q15061 677 aaKnown RBP eCLIP7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 CCDC96Q2M329 555 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 TM4SF20Q53R12 229 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 LEO1Q8WVC0 666 aaPredicted RBP7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 SCLT1Q96NL6 688 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 SRRTQ9BXP5 876 aaKnown RBP7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 MRGBPQ9NV56 204 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 MCM8Q9UJA3 840 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 USP3Q9Y6I4 520 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 TMEM131LA2VDJ0 1609 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 SMTNL1A8MU46 457 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 GOLGA6L6A8MZA4 724 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 RHOBTB3O94955 611 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 IGFBP4P22692 258 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 COL9A2Q14055 689 aaPredicted RBP7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 RHOBTB2Q9BYZ6 727 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 NGRNQ9NPE2 291 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms