RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 USP21Q9UK80 565 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 MSRB2Q9Y3D2 182 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.5□□□□□ -1.05
MARK3-220ENST00000560417 UPK3BL1B0FP48 263 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 UPK3BL2E5RIL1 263 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 MBTPS1Q14703 1052 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 GIMAP6Q6P9H5 292 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 TTC6Q86TZ1 520 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 TRIM55Q9BYV6 548 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 CEP41Q9BYV8 373 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 ACSS3Q9H6R3 686 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 ZSWIM4Q9H7M6 989 aa8.5□□□□□ -1.05
MARK3-220ENST00000560417 IREB2P48200 963 aaKnown RBP8.49□□□□□ -1.05
MARK3-220ENST00000560417 ARSHQ5FYA8 562 aa8.49□□□□□ -1.05
MARK3-220ENST00000560417 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
MARK3-220ENST00000560417 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
MARK3-220ENST00000560417 KLHL3Q9UH77 587 aa8.49□□□□□ -1.05
MARK3-220ENST00000560417 CDK11AQ9UQ88 783 aaPredicted RBP8.49□□□□□ -1.05
MARK3-220ENST00000560417 K7ELQ4 463 aaPredicted RBP8.48□□□□□ -1.05
MARK3-220ENST00000560417 APBA3O96018 575 aa8.48□□□□□ -1.05
MARK3-220ENST00000560417 YARSP54577 528 aaKnown RBP8.48□□□□□ -1.05
MARK3-220ENST00000560417 RASA3Q14644 834 aa8.48□□□□□ -1.05
MARK3-220ENST00000560417 ZYXQ15942 572 aaKnown RBP8.48□□□□□ -1.05
MARK3-220ENST00000560417 DDR2Q16832 855 aa8.48□□□□□ -1.05
MARK3-220ENST00000560417 UVSSAQ2YD98 709 aa8.48□□□□□ -1.05
MARK3-220ENST00000560417 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.48□□□□□ -1.05
MARK3-220ENST00000560417 FAM13CQ8NE31 585 aa8.48□□□□□ -1.05
MARK3-220ENST00000560417 MICAL1Q8TDZ2 1067 aa8.48□□□□□ -1.05
MARK3-220ENST00000560417 EZH1Q92800 747 aaPredicted RBP8.48□□□□□ -1.05
MARK3-220ENST00000560417 SLC9A7Q96T83 725 aa8.48□□□□□ -1.05
MARK3-220ENST00000560417 PIDD1Q9HB75 910 aa8.48□□□□□ -1.05
MARK3-220ENST00000560417 R3HCC1Q9Y3T6 440 aaKnown RBP8.48□□□□□ -1.05
MARK3-220ENST00000560417 CST3P01034 146 aaPredicted RBP8.47□□□□□ -1.05
MARK3-220ENST00000560417 GLB1P16278 677 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 CCNFP41002 786 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 PPP2R5EQ16537 467 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 UNC5AQ6ZN44 842 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 CDC37L1Q7L3B6 337 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 LRP10Q7Z4F1 713 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 PCOLCE2Q9UKZ9 415 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 SLC12A7Q9Y666 1083 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 LTBP3Q9NS15 1303 aa8.47□□□□□ -1.05
MARK3-220ENST00000560417 U2SURPO15042 1029 aaKnown RBP8.46□□□□□ -1.06
MARK3-220ENST00000560417 RNGTTO60942 597 aaKnown RBP8.46□□□□□ -1.06
MARK3-220ENST00000560417 BMS1Q14692 1282 aaKnown RBP8.46□□□□□ -1.06
MARK3-220ENST00000560417 ARMC10Q8N2F6 343 aa8.46□□□□□ -1.06
MARK3-220ENST00000560417 MEGF10Q96KG7 1140 aa8.46□□□□□ -1.06
MARK3-220ENST00000560417 PSMG3-AS1Q96PY0 264 aa8.46□□□□□ -1.06
MARK3-220ENST00000560417 CCDC113Q9H0I3 377 aa8.46□□□□□ -1.06
MARK3-220ENST00000560417 SEMA6CQ9H3T2 930 aa8.46□□□□□ -1.06
MARK3-220ENST00000560417 RGS13O14921 159 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 SART1O43290 800 aaKnown RBP8.45□□□□□ -1.06
MARK3-220ENST00000560417 LRIG2O94898 1065 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 RAG1P15918 1043 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 FXNQ16595 210 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 PRAMEF13Q5VWM6 474 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 ZNF746Q6NUN9 644 aaPredicted RBP8.45□□□□□ -1.06
MARK3-220ENST00000560417 SEZ6L2Q6UXD5 910 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 TXNRD3Q86VQ6 643 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 MYRFLQ96LU7 910 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 DPH2Q9BQC3 489 aaPredicted RBP8.45□□□□□ -1.06
MARK3-220ENST00000560417 SSBP4Q9BWG4 385 aaPredicted RBP8.45□□□□□ -1.06
MARK3-220ENST00000560417 SNTG2Q9NY99 539 aa8.45□□□□□ -1.06
MARK3-220ENST00000560417 UBOX5O94941 541 aa8.44□□□□□ -1.06
MARK3-220ENST00000560417 POLR2BP30876 1174 aaKnown RBP8.44□□□□□ -1.06
MARK3-220ENST00000560417 SGO2Q562F6 1265 aa8.44□□□□□ -1.06
MARK3-220ENST00000560417 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.44□□□□□ -1.06
MARK3-220ENST00000560417 CYB5D2Q8WUJ1 264 aa8.44□□□□□ -1.06
MARK3-220ENST00000560417 FOXQ1Q9C009 403 aa8.44□□□□□ -1.06
MARK3-220ENST00000560417 MAPK8IP1Q9UQF2 711 aa8.44□□□□□ -1.06
MARK3-220ENST00000560417 CADPSQ9ULU8 1353 aa8.44□□□□□ -1.06
MARK3-220ENST00000560417 KRBA1A5PL33 1030 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 FAM221BA6H8Z2 402 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 GAS2O43903 313 aaKnown RBP8.43□□□□□ -1.06
MARK3-220ENST00000560417 GJB6O95452 261 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 RAB6AP20340 208 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 USP11P51784 963 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 LARP1BQ659C4 914 aaKnown RBP8.43□□□□□ -1.06
MARK3-220ENST00000560417 ARMCX6Q7L4S7 300 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 PHACTR4Q8IZ21 702 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 MFSD2AQ8NA29 543 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 PPP1R13LQ8WUF5 828 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 FBLIM1Q8WUP2 373 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 CCDC74BQ96LY2 380 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 DEPDC7Q96QD5 511 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 SRPK1Q96SB4 655 aaKnown RBP8.43□□□□□ -1.06
MARK3-220ENST00000560417 KIF2CQ99661 725 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 PHAXQ9H814 394 aaKnown RBP8.43□□□□□ -1.06
MARK3-220ENST00000560417 ST7Q9NRC1 585 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 TBX22Q9Y458 520 aa8.43□□□□□ -1.06
MARK3-220ENST00000560417 TLDC2A0PJX2 215 aa8.42□□□□□ -1.06
MARK3-220ENST00000560417 SMARCA5O60264 1052 aaPredicted RBP8.42□□□□□ -1.06
MARK3-220ENST00000560417 NFICP08651 508 aa8.42□□□□□ -1.06
MARK3-220ENST00000560417 CHRNA4P43681 627 aa8.42□□□□□ -1.06
MARK3-220ENST00000560417 C6orf15Q6UXA7 325 aaPredicted RBP8.42□□□□□ -1.06
MARK3-220ENST00000560417 TMEM192Q8IY95 271 aa8.42□□□□□ -1.06
MARK3-220ENST00000560417 SSU72Q9NP77 194 aaKnown RBP8.42□□□□□ -1.06
MARK3-220ENST00000560417 ZNF214Q9UL59 606 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms