RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	VTI1A	Q96AJ9	217 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	UIMC1	Q96RL1	719 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	MTMR6	Q9Y217	621 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	CDC42BPG	Q6DT37	1551 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	SMCO2	A6NFE2	343 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	TRIM37	O94972	964 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	PKP1	Q13835	747 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	RGS22	Q8NE09	1264 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	FRMD4B	Q9Y2L6	1034 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	CDC42BPB	Q9Y5S2	1711 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	PDIA3	P30101	505 aa	Known RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	BMS1	Q14692	1282 aa	Known RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	MAATS1	Q7Z4T9	603 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	KIAA0825	Q8IV33	1275 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	CSGALNACT2	Q8N6G5	542 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	IGSF22	Q8N9C0	903 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	LMBR1	Q8WVP7	490 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	MED23	Q9ULK4	1368 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	ADGRL3	Q9HAR2	1447 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	BCORL1	Q5H9F3	1711 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	CFB	P00751	764 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	MYCL	P12524	364 aa	Predicted RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	EZR	P15311	586 aa	Known RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	FANCC	Q00597	558 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	PRKG1	Q13976	671 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	POLA2	Q14181	598 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	ZNF569	Q5MCW4	686 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	BIN2	Q9UBW5	565 aa	Predicted RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	RGS12	O14924	1447 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	XDH	P47989	1333 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328		M0R2C6	588 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	NCBP1	Q09161	790 aa	Known RBP	10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	RAPGEF1	Q13905	1077 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	NOSTRIN	Q8IVI9	506 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	PNMA1	Q8ND90	353 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	TMEM63C	Q9P1W3	806 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	SYNRG	Q9UMZ2	1314 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	SLU7	O95391	586 aa	Known RBP	10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	PAK1	Q13153	545 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	ADAL	Q6DHV7	355 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	SYT10	Q6XYQ8	523 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	HOOK2	Q96ED9	719 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	CROCC2	H7BZ55	1655 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	CYP21A2	P08686	494 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	EPB41	P11171	864 aa	Known RBP	10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	CEP112	Q8N8E3	955 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	USP28	Q96RU2	1077 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	SRRT	Q9BXP5	876 aa	Known RBP	10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	PTCH1	Q13635	1447 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	ZBED4	O75132	1171 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	PRPH	P41219	470 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	MAP2K1	Q02750	393 aa	Predicted RBP	10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	SCRN1	Q12765	414 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	CABP7	Q86V35	215 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	STAM	Q92783	540 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	LEMD3	Q9Y2U8	911 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	SASH1	O94885	1247 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	DYM	Q7RTS9	669 aa		10.48	□□□□□ -0.73
NEO1-208	ENST00000560328	SEMA3E	O15041	775 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	SERPINB2	P05120	415 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	PI16	Q6UXB8	463 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	HOMER2	Q9NSB8	354 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	CCDC169	A6NNP5	214 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	DDX39A	O00148	427 aa	Known RBP	10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	ZNF75D	P51815	510 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
NEO1-208	ENST00000560328		V9GYY5	206 aa	Predicted RBP	10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	TMEM110-MUSTN1	A8MSY1	372 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	ACTN2	P35609	894 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	BLID	Q8IZY5	108 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	KIFC2	Q96AC6	838 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	SERTAD1	Q9UHV2	236 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	DNM3	Q9UQ16	869 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	THRAP3	Q9Y2W1	955 aa	Known RBP	10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	NFE2L3	Q9Y4A8	694 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	ADGRB3	O60242	1522 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	MADD	Q8WXG6	1647 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	ARHGEF35	A5YM69	484 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	SPDYE4	A6NLX3	237 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	GOLGA8H	P0CJ92	632 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	SMTN	P53814	917 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	NSMF	Q6X4W1	530 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	CAPZA3	Q96KX2	299 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	BLZF1	Q9H2G9	400 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	STK24	Q9Y6E0	443 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	ABCA9	Q8IUA7	1624 aa		10.47	□□□□□ -0.73
NEO1-208	ENST00000560328	KLRF2	D3W0D1	207 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328		H7C1W4	665 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328	ADD2	P35612	726 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328	PNOC	Q13519	176 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328	CNKSR1	Q969H4	720 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328	ZNF408	Q9H9D4	720 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328	ARFGAP3	Q9NP61	516 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328	ATP8A2	Q9NTI2	1148 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328	NCAPD2	Q15021	1401 aa		10.46	□□□□□ -0.73
NEO1-208	ENST00000560328	PPEF1	O14829	653 aa	Predicted RBP	10.46	□□□□□ -0.73

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