RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 MMP14P50281 582 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 RCAN1P53805 252 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 ST3GAL1Q11201 340 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 SLC4A8Q2Y0W8 1093 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 CFAP100Q494V2 611 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 IFIT1BQ5T764 474 aaKnown RBP12.41□□□□□ -0.42
CRTC3-209ENST00000560320 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 APOA5Q6Q788 366 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 CATIPQ7Z7H3 387 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 SMC1BQ8NDV3 1235 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
CRTC3-209ENST00000560320 AGBL3Q8NEM8 1001 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 ZKSCAN3Q9BRR0 538 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 TRIM34Q9BYJ4 488 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 TACC3Q9Y6A5 838 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 DICER1Q9UPY3 1922 aaKnown RBP12.41□□□□□ -0.42
CRTC3-209ENST00000560320 PDE4DIPQ5VU43 2346 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 TSPY3P0CV98 308 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 EIF6P56537 245 aaKnown RBP12.4□□□□□ -0.42
CRTC3-209ENST00000560320 DLGAP5Q15398 846 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.42
CRTC3-209ENST00000560320 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
CRTC3-209ENST00000560320 CLEC17AQ6ZS10 378 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 C16orf86Q6ZW13 317 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 MICU3Q86XE3 530 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 SMARCC2Q8TAQ2 1214 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.42
CRTC3-209ENST00000560320 DDX11Q96FC9 970 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
CRTC3-209ENST00000560320 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
CRTC3-209ENST00000560320 JAK2O60674 1132 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 BAG4O95429 457 aaKnown RBP12.39□□□□□ -0.43
CRTC3-209ENST00000560320 CDK8P49336 464 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 TFAP4Q01664 338 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 RTN1Q16799 776 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
CRTC3-209ENST00000560320 ZNF654Q8IZM8 581 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 DYNLL2Q96FJ2 89 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 OSBPL5Q9H0X9 879 aaPredicted RBP12.39□□□□□ -0.43
CRTC3-209ENST00000560320 DHX36Q9H2U1 1008 aaKnown RBP12.39□□□□□ -0.43
CRTC3-209ENST00000560320 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 SWAP70Q9UH65 585 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 MYH15Q9Y2K3 1946 aa12.39□□□□□ -0.43
CRTC3-209ENST00000560320 MYO1BO43795 1136 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 NPM3O75607 178 aaKnown RBP12.38□□□□□ -0.43
CRTC3-209ENST00000560320 WDHD1O75717 1129 aaPredicted RBP12.38□□□□□ -0.43
CRTC3-209ENST00000560320 DDAH1O94760 285 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 F13A1P00488 732 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 PLCD1P51178 756 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
CRTC3-209ENST00000560320 PKP1Q13835 747 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 SEC23AQ15436 765 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 CSPP1Q1MSJ5 1256 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 FAM47AQ5JRC9 791 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 RAB11FIP4Q86YS3 637 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 CRACR2BQ8N4Y2 399 aaPredicted RBP12.38□□□□□ -0.43
CRTC3-209ENST00000560320 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
CRTC3-209ENST00000560320 NUP133Q8WUM0 1156 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 WASF1Q92558 559 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 IDI2Q9BXS1 227 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 RBM28Q9NW13 759 aaKnown RBP12.38□□□□□ -0.43
CRTC3-209ENST00000560320 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
CRTC3-209ENST00000560320 HPS5Q9UPZ3 1129 aa12.38□□□□□ -0.43
CRTC3-209ENST00000560320 NFKBIEO00221 500 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 ENTPD3O75355 529 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
CRTC3-209ENST00000560320 AKAP17AQ02040 695 aaKnown RBP12.37□□□□□ -0.43
CRTC3-209ENST00000560320 CXCL9Q07325 125 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 SKOR2Q2VWA4 1001 aaPredicted RBP12.37□□□□□ -0.43
CRTC3-209ENST00000560320 MCTP1Q6DN14 999 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 DGKHQ86XP1 1220 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 CCDC144CPQ8IYA2 1237 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 CTCFLQ8NI51 663 aaPredicted RBP12.37□□□□□ -0.43
CRTC3-209ENST00000560320 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 SERPINB13Q9UIV8 391 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 MTMR6Q9Y217 621 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 ZDHHC9Q9Y397 364 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 NID2Q14112 1375 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
CRTC3-209ENST00000560320 COL4A5P29400 1685 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 CTDNEP1O95476 244 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
CRTC3-209ENST00000560320 RASA1P20936 1047 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 KIF5BP33176 963 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 RASSF7Q02833 373 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 TRIM29Q14134 588 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 FANCBQ8NB91 859 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 NEDD1Q8NHV4 660 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 NKX2-3Q8TAU0 364 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 GMLQ99445 158 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 MYL10Q9BUA6 226 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 EHD4Q9H223 541 aa12.36□□□□□ -0.43
CRTC3-209ENST00000560320 TDRD3Q9H7E2 651 aaKnown RBP12.36□□□□□ -0.43
CRTC3-209ENST00000560320 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms