RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 MBD4O95243 580 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 SHMT1P34896 483 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 PDE1AP54750 535 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 OTOP1Q7RTM1 612 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 TICAM2Q86XR7 235 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 APPBP2Q92624 585 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 OSBP2Q969R2 916 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 STRBPQ96SI9 672 aaKnown RBP15.93■□□□□ 0.14
SMAD3-213ENST00000560175 AS3MTQ9HBK9 375 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 MCM9Q9NXL9 1143 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 TRIM75PA6NK02 468 aa15.92■□□□□ 0.14
SMAD3-213ENST00000560175 BCRP11274 1271 aa15.92■□□□□ 0.14
SMAD3-213ENST00000560175 BACE1P56817 501 aa15.92■□□□□ 0.14
SMAD3-213ENST00000560175 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
SMAD3-213ENST00000560175 C12orf60Q5U649 245 aa15.92■□□□□ 0.14
SMAD3-213ENST00000560175 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
SMAD3-213ENST00000560175 FBXO46Q6PJ61 603 aaPredicted RBP15.92■□□□□ 0.14
SMAD3-213ENST00000560175 ZBTB21Q9ULJ3 1066 aa15.92■□□□□ 0.14
SMAD3-213ENST00000560175 AGTPBP1Q9UPW5 1226 aa15.92■□□□□ 0.14
SMAD3-213ENST00000560175 C19orf81C9J6K1 198 aa15.91■□□□□ 0.14
SMAD3-213ENST00000560175 POLR3DP05423 398 aaPredicted RBP15.91■□□□□ 0.14
SMAD3-213ENST00000560175 NUCB1Q02818 461 aa15.91■□□□□ 0.14
SMAD3-213ENST00000560175 EVX2Q03828 476 aa15.91■□□□□ 0.14
SMAD3-213ENST00000560175 LRRFIP1Q32MZ4 808 aaKnown RBP15.91■□□□□ 0.14
SMAD3-213ENST00000560175 CD99L2Q8TCZ2 262 aa15.91■□□□□ 0.14
SMAD3-213ENST00000560175 TRIM34Q9BYJ4 488 aa15.91■□□□□ 0.14
SMAD3-213ENST00000560175 OSBPL3Q9H4L5 887 aa15.91■□□□□ 0.14
SMAD3-213ENST00000560175 GSG1L2A8MUP6 293 aa15.9■□□□□ 0.14
SMAD3-213ENST00000560175 HOXA7P31268 230 aaPredicted RBP15.9■□□□□ 0.14
SMAD3-213ENST00000560175 GUCY1A2P33402 732 aa15.9■□□□□ 0.14
SMAD3-213ENST00000560175 LACTBP83111 547 aaPredicted RBP15.9■□□□□ 0.14
SMAD3-213ENST00000560175 SLC4A8Q2Y0W8 1093 aa15.9■□□□□ 0.14
SMAD3-213ENST00000560175 CERKLQ49MI3 558 aaPredicted RBP15.9■□□□□ 0.14
SMAD3-213ENST00000560175 SBK1Q52WX2 424 aa15.9■□□□□ 0.14
SMAD3-213ENST00000560175 PARK7Q99497 189 aaKnown RBP15.9■□□□□ 0.14
SMAD3-213ENST00000560175 SWAP70Q9UH65 585 aa15.9■□□□□ 0.14
SMAD3-213ENST00000560175 MYH8P13535 1937 aa15.9■□□□□ 0.14
SMAD3-213ENST00000560175 USP17L10C9JJH3 530 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 USP17L12C9JPN9 530 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 USP17L21D6R901 530 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 GDF11O95390 407 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 GNRH1P01148 92 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 GH2P01242 217 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 CYP2C8P10632 490 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 RGS19P49795 217 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 ZMYM1Q5SVZ6 1142 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 TREML2Q5T2D2 321 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 CTR9Q6PD62 1173 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 GADL1Q6ZQY3 521 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 CHD1LQ86WJ1 897 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 EFCC1Q9HA90 598 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
SMAD3-213ENST00000560175 HPS5Q9UPZ3 1129 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 PTPN22Q9Y2R2 807 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 TRIM17Q9Y577 477 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 SLC4A4Q9Y6R1 1079 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 CENPFP49454 3210 aa15.89■□□□□ 0.13
SMAD3-213ENST00000560175 MGAMO43451 1857 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 CYP2D6P10635 497 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 HMGCS2P54868 508 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 ARHGEF6Q15052 776 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 ABCB5Q2M3G0 1257 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 EVI5LQ96CN4 794 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 C12orf42Q96LP6 360 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 LNPKQ9C0E8 428 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 CPA4Q9UI42 421 aa15.88■□□□□ 0.13
SMAD3-213ENST00000560175 ZSWIM8A7E2V4 1837 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 PATL2C9JE40 543 aaKnown RBP15.87■□□□□ 0.13
SMAD3-213ENST00000560175 SMIM22K7EJ46 135 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 M0R2C6 588 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 GPAA1O43292 621 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 GNAT2P19087 354 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 CTGFP29279 349 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 C16orf86Q6ZW13 317 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 PLEKHM2Q8IWE5 1019 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 KIAA1683Q9H0B3 1180 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 EMILIN3Q9NT22 766 aa15.87■□□□□ 0.13
SMAD3-213ENST00000560175 DOCK3Q8IZD9 2030 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 CCDC85CA6NKD9 419 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 CAPN15O75808 1086 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 CDK8P49336 464 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 PABPC4Q13310 644 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMAD3-213ENST00000560175 MTMR2Q13614 643 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 SIAH1Q8IUQ4 282 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 DYNLL2Q96FJ2 89 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 CCDC17Q96LX7 622 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 SEC62Q99442 399 aaKnown RBP15.86■□□□□ 0.13
SMAD3-213ENST00000560175 CABP5Q9NP86 173 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 ARPP21Q9UBL0 812 aaPredicted RBP15.86■□□□□ 0.13
SMAD3-213ENST00000560175 PNMA3Q9UL41 463 aa15.86■□□□□ 0.13
SMAD3-213ENST00000560175 CYP2D7A0A087X1C5 515 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 PRMT2P55345 433 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 B4GALNT3Q6L9W6 998 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 USP17L2Q6R6M4 530 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 SLC44A5Q8NCS7 719 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 FSD1Q9BTV5 496 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 ARHGAP39Q9C0H5 1083 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 ASCC2Q9H1I8 757 aaPredicted RBP15.85■□□□□ 0.13
SMAD3-213ENST00000560175 EPB41L4AQ9HCS5 686 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms