RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PDE6BP35913 854 aa21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 HDGFL1Q5TGJ6 251 aa21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 CDCA2Q69YH5 1023 aaPredicted RBP21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 YTHDF3Q7Z739 585 aaKnown RBP21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 SIL1Q9H173 461 aa21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 MYO6Q9UM54 1294 aa21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 AHDC1Q5TGY3 1603 aaPredicted RBP21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 SSBP05455 408 aaKnown RBP eCLIP21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 MYL5Q02045 173 aa21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 TBX2Q13207 712 aaPredicted RBP21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 GOLGA6BA6NDN3 693 aa21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 IL2RBP14784 551 aa21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 SPDYE1Q8NFV5 336 aaPredicted RBP21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 ZCRB1Q8TBF4 217 aaKnown RBP21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 LMBR1Q8WVP7 490 aa21.63■■□□□ 1.05
SEMA4B-215ENST00000560089 SF3B2Q13435 895 aaKnown RBP21.62■■□□□ 1.05
SEMA4B-215ENST00000560089 KCNB1Q14721 858 aa21.62■■□□□ 1.05
SEMA4B-215ENST00000560089 MAB21L3Q8N8X9 362 aa21.62■■□□□ 1.05
SEMA4B-215ENST00000560089 STK31Q9BXU1 1019 aa21.62■■□□□ 1.05
SEMA4B-215ENST00000560089 PCDHA7Q9UN72 937 aa21.62■■□□□ 1.05
SEMA4B-215ENST00000560089 RPS6KB1P23443 525 aa21.62■■□□□ 1.05
SEMA4B-215ENST00000560089 PDCD2Q16342 344 aaPredicted RBP21.62■■□□□ 1.05
SEMA4B-215ENST00000560089 MAGEC3Q8TD91 643 aa21.62■■□□□ 1.05
SEMA4B-215ENST00000560089 FAM228AQ86W67 206 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 SLC35F6Q8N357 371 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 SH3GL2Q99962 352 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 PHAXQ9H814 394 aaKnown RBP21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 A0A0U1RQJ8 604 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 ATRIPQ8WXE1 791 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 ARMC3Q5W041 872 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 CYB5D1Q6P9G0 228 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 NAPGQ99747 312 aaPredicted RBP21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 SLC52A2Q9HAB3 445 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 INTS13Q9NVM9 706 aa21.61■■□□□ 1.05
SEMA4B-215ENST00000560089 SOWAHDA6NJG2 315 aa21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 SLC27A2O14975 620 aa21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 SLC8A1P32418 973 aa21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 BATF3Q9NR55 127 aa21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 NAP1L1P55209 391 aaKnown RBP21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 PDCLQ13371 301 aa21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 KLHL23Q8NBE8 558 aa21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 SMARCC2Q8TAQ2 1214 aa21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 CCDC114Q96M63 670 aa21.6■■□□□ 1.05
SEMA4B-215ENST00000560089 GOLGA6L7A0A1B0GV03 622 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 PRPHP41219 470 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 RAB27AP51159 221 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 USP14P54578 494 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 SLC5A9Q2M3M2 681 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 ADALQ6DHV7 355 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 NCAPH2Q6IBW4 605 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 CHPF2Q9P2E5 772 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 ADGRG1Q9Y653 693 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 OVOS2A0A0G2JMS6 1433 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 COL16A1Q07092 1604 aaPredicted RBP21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 ATL3Q6DD88 541 aa21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 TPX2Q9ULW0 747 aaKnown RBP21.59■■□□□ 1.05
SEMA4B-215ENST00000560089 NEDD4P46934 1319 aa21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 A6NNZ2 444 aa21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 TUBB8Q3ZCM7 444 aa21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 SPECC1LQ69YQ0 1117 aa21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 RPUSD2Q8IZ73 545 aaKnown RBP21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 SELENOOQ9BVL4 669 aa21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 HOMER3Q9NSC5 361 aa21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 ABCC6O95255 1503 aa21.58■■□□□ 1.05
SEMA4B-215ENST00000560089 GOLGA8KD6RF30 607 aa21.58■■□□□ 1.04
SEMA4B-215ENST00000560089 TBC1D25Q3MII6 688 aa21.58■■□□□ 1.04
SEMA4B-215ENST00000560089 C3orf20Q8ND61 904 aa21.58■■□□□ 1.04
SEMA4B-215ENST00000560089 PIP4K2AP48426 406 aaPredicted RBP21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 CABP4P57796 275 aa21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 TTLL7Q6ZT98 887 aa21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 FBXO3Q9UK99 471 aa21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 COQ9O75208 318 aa21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 SURF6O75683 361 aaKnown RBP21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 FLIIQ13045 1269 aa21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 SF3A1Q15459 793 aaKnown RBP21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 GSPT2Q8IYD1 628 aaKnown RBP21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 DCAF5Q96JK2 942 aa21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 CDC5LQ99459 802 aaKnown RBP21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 ALDH8A1Q9H2A2 487 aaPredicted RBP21.57■■□□□ 1.04
SEMA4B-215ENST00000560089 A0A1W2PQ27 194 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 A0A1W2PQ64 194 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 A0A1W2PQD8 194 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 FUKQ8N0W3 1084 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 RHPN1Q8TCX5 695 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 MYH15Q9Y2K3 1946 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 ZEB2O60315 1214 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 CCT2P78371 535 aaKnown RBP21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 HSP90AA4PQ58FG1 418 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 NAA35Q5VZE5 725 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 ZNF790Q6PG37 636 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 DRAXINQ8NBI3 349 aaPredicted RBP21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 PAGR1Q9BTK6 254 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 SKOR1P84550 965 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 IFT88Q13099 833 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 PROSER3Q2NL68 480 aa21.56■■□□□ 1.04
SEMA4B-215ENST00000560089 CAPRIN2Q6IMN6 1127 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms