RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PI4KBQ9UBF8 816 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 LAMB1P07942 1786 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 ORC4O43929 436 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 RASA1P20936 1047 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.633e-7■■■■□ 25.7
HERC1-206ENST00000559996 PNMA8AQ86V59 439 aaPredicted RBP11.13□□□□□ -0.63
HERC1-206ENST00000559996 STK11IPQ8N1F8 1099 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 TTC14Q96N46 770 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.13□□□□□ -0.63
HERC1-206ENST00000559996 TMOD2Q9NZR1 351 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 SERPINB13Q9UIV8 391 aa11.13□□□□□ -0.63
HERC1-206ENST00000559996 SSC5DA1L4H1 1573 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 FAM196BA6NMK8 535 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 ADM5C9JUS6 153 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 KIF3CO14782 793 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 PRDM1O75626 825 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 TNFAIP1Q13829 316 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 SHROOM1Q2M3G4 852 aaPredicted RBP11.12□□□□□ -0.63
HERC1-206ENST00000559996 EAPPQ56P03 285 aaPredicted RBP11.12□□□□□ -0.63
HERC1-206ENST00000559996 RNF20Q5VTR2 975 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 MFSD6Q6ZSS7 791 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 APOBEC3FQ8IUX4 373 aaKnown RBP11.12□□□□□ -0.63
HERC1-206ENST00000559996 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
HERC1-206ENST00000559996 NEK1Q96PY6 1258 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 CSRNP1Q96S65 589 aa11.12□□□□□ -0.63
HERC1-206ENST00000559996 B4E1Z4 1266 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 ZKSCAN1P17029 563 aaPredicted RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 MCCP23508 829 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 GUCY1A2P33402 732 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 NOVP48745 357 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 TNNI2P48788 182 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 DCPSQ96C86 337 aaKnown RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 AGXT2Q9BYV1 514 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 GLIS2Q9BZE0 524 aaPredicted RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 GPHNQ9NQX3 736 aaPredicted RBP11.11□□□□□ -0.63
HERC1-206ENST00000559996 IL17RBQ9NRM6 502 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 ZNF112Q9UJU3 913 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 FZD1Q9UP38 647 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 PPP2R3BQ9Y5P8 575 aa11.11□□□□□ -0.63
HERC1-206ENST00000559996 IGKV6D-41A0A0C4DH26 115 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 KDM4AO75164 1064 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 USP2O75604 605 aaPredicted RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 HLA-DOAP06340 250 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 PCP11498 1178 aaKnown RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 CASTP20810 708 aaKnown RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 RPS6KB1P23443 525 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 IRX5P78411 483 aaPredicted RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 TOB2Q14106 344 aaPredicted RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 KRT32Q14532 448 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 SEC23AQ15436 765 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 FAM47AQ5JRC9 791 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 CDC37L1Q7L3B6 337 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 DHX32Q7L7V1 743 aaKnown RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 CHST3Q7LGC8 479 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 KRT26Q7Z3Y9 468 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 SIAH1Q8IUQ4 282 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 ZSCAN29Q8IWY8 852 aaPredicted RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 FBXL16Q8N461 479 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 SENP2Q9HC62 589 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
HERC1-206ENST00000559996 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
HERC1-206ENST00000559996 NMT2O60551 498 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 AKR1B1P15121 316 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 PSMA5P28066 241 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 PDE4BQ07343 736 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 RCSD1Q6JBY9 416 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 LDHDQ86WU2 507 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 NEDD1Q8NHV4 660 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 KRT23Q9C075 422 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 RNF41Q9H4P4 317 aaPredicted RBP11.09□□□□□ -0.63
HERC1-206ENST00000559996 CNNM2Q9H8M5 875 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.09□□□□□ -0.63
HERC1-206ENST00000559996 TCP11L1Q9NUJ3 509 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 PCDH10Q9P2E7 1040 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
HERC1-206ENST00000559996 GREB1LQ9C091 1923 aaPredicted RBP11.09□□□□□ -0.63
HERC1-206ENST00000559996 TRAF5O00463 557 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 NEK4P51957 841 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 TFAP4Q01664 338 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 RABEP1Q15276 862 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 MAP3K11Q16584 847 aa11.08□□□□□ -0.64
HERC1-206ENST00000559996 RRP12Q5JTH9 1297 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms