RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 DRC7Q8IY82 874 aa9.32□□□□□ -0.92
SMAD3-212ENST00000559937 CCDC144CPQ8IYA2 1237 aa9.32□□□□□ -0.92
SMAD3-212ENST00000559937 DIS3L2Q8IYB7 885 aaKnown RBP9.32□□□□□ -0.92
SMAD3-212ENST00000559937 KRI1Q8N9T8 703 aaKnown RBP9.32□□□□□ -0.92
SMAD3-212ENST00000559937 ZNF579Q8NAF0 562 aaKnown RBP9.32□□□□□ -0.92
SMAD3-212ENST00000559937 SPC24Q8NBT2 197 aa9.32□□□□□ -0.92
SMAD3-212ENST00000559937 WDR66Q8TBY9 1149 aa9.32□□□□□ -0.92
SMAD3-212ENST00000559937 SDR42E1Q8WUS8 393 aa9.32□□□□□ -0.92
SMAD3-212ENST00000559937 ZSCAN10Q96SZ4 725 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-212ENST00000559937 IMPACTQ9P2X3 320 aa9.32□□□□□ -0.92
SMAD3-212ENST00000559937 CLIP2Q9UDT6 1046 aa9.32□□□□□ -0.92
SMAD3-212ENST00000559937 SRP68Q9UHB9 627 aaKnown RBP9.32□□□□□ -0.92
SMAD3-212ENST00000559937 HOOK1Q9UJC3 728 aaKnown RBP9.32□□□□□ -0.92
SMAD3-212ENST00000559937 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-212ENST00000559937 ROBO3Q96MS0 1386 aa9.32□□□□□ -0.92
SMAD3-212ENST00000559937 MYH8P13535 1937 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 PTGS1P23219 599 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 PTPREP23469 700 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 BAG6P46379 1132 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 GSDMDP57764 484 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 GSTO1P78417 241 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 FUT2Q10981 343 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 GRAPQ13588 217 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 IFIT1BQ5T764 474 aaKnown RBP9.31□□□□□ -0.92
SMAD3-212ENST00000559937 CTR9Q6PD62 1173 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 SHC4Q6S5L8 630 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 FAM196AQ6ZSG2 479 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 CCDC186Q7Z3E2 898 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 FAM177A1Q8N128 213 aaPredicted RBP9.31□□□□□ -0.92
SMAD3-212ENST00000559937 AOPEPQ8N6M6 819 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 ENAHQ8N8S7 591 aaPredicted RBP9.31□□□□□ -0.92
SMAD3-212ENST00000559937 GRAPLQ8TC17 118 aaPredicted RBP9.31□□□□□ -0.92
SMAD3-212ENST00000559937 ZNF384Q8TF68 577 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
SMAD3-212ENST00000559937 ZNF830Q96NB3 372 aaPredicted RBP9.31□□□□□ -0.92
SMAD3-212ENST00000559937 ZKSCAN3Q9BRR0 538 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 BCL11BQ9C0K0 894 aaPredicted RBP9.31□□□□□ -0.92
SMAD3-212ENST00000559937 ANO8Q9HCE9 1232 aaPredicted RBP9.31□□□□□ -0.92
SMAD3-212ENST00000559937 QSER1Q2KHR3 1735 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 XDHP47989 1333 aa9.31□□□□□ -0.92
SMAD3-212ENST00000559937 BTBD18B2RXH4 712 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 LDHCP07864 332 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 MARCKSP29966 332 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-212ENST00000559937 PDE4BQ07343 736 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 DNTTIP2Q5QJE6 756 aaKnown RBP9.3□□□□□ -0.92
SMAD3-212ENST00000559937 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 KANK3Q6NY19 840 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 KRBA2Q6ZNG9 492 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 TMTC3Q6ZXV5 915 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 MYRIPQ8NFW9 859 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 PHF20Q9BVI0 1012 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 BRMS1Q9HCU9 246 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 DCP1AQ9NPI6 582 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-212ENST00000559937 FAM13BQ9NYF5 915 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-212ENST00000559937 PYCARDQ9ULZ3 195 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 SRPRBQ9Y5M8 271 aaKnown RBP9.3□□□□□ -0.92
SMAD3-212ENST00000559937 NRXN2Q9P2S2 1712 aa9.3□□□□□ -0.92
SMAD3-212ENST00000559937 UQCRHLA0A096LP55 91 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 USP17L21D6R901 530 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 RRP9O43818 475 aaKnown RBP9.29□□□□□ -0.92
SMAD3-212ENST00000559937 UQCRHP07919 91 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 GUCY1A2P33402 732 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 RFC4P35249 363 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 GTF2F1P35269 517 aaKnown RBP eCLIP9.29□□□□□ -0.921e-8■■■■■ 46.3
SMAD3-212ENST00000559937 KRT2P35908 639 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 TOB1P50616 345 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-212ENST00000559937 PPP4CP60510 307 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 EN1Q05925 392 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-212ENST00000559937 TROAPQ12815 778 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 CHAF1AQ13111 956 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-212ENST00000559937 PKN1Q16512 942 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 DPCR1Q3MIW9 517 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 ZNF804AQ7Z570 1209 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 MTERF4Q7Z6M4 381 aaKnown RBP9.29□□□□□ -0.92
SMAD3-212ENST00000559937 STK11IPQ8N1F8 1099 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 TRIML1Q8N9V2 468 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 NUP133Q8WUM0 1156 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 ANKS1AQ92625 1134 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 CCDC34Q96HJ3 373 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 MAP7D2Q96T17 732 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 OSBPL5Q9H0X9 879 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-212ENST00000559937 KCND1Q9NSA2 647 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 KCNH3Q9ULD8 1083 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 ANKRD31Q8N7Z5 1873 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 CNTNAP5Q8WYK1 1306 aa9.29□□□□□ -0.92
SMAD3-212ENST00000559937 TRIM75PA6NK02 468 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 CBFA2T2O43439 604 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 TRIM37O94972 964 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 BAG3O95817 575 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 LDHBP07195 334 aaKnown RBP9.28□□□□□ -0.92
SMAD3-212ENST00000559937 KLRK1P26718 216 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 PRDX5P30044 214 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 KIF5BP33176 963 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 KCNJ6P48051 423 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 TRAPPC10P48553 1259 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 KCNQ4P56696 695 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 MYL5Q02045 173 aa9.28□□□□□ -0.92
SMAD3-212ENST00000559937 NFIXQ14938 502 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms