RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 INPP5BP32019 993 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 FKBP1BP68106 108 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 TFAP4Q01664 338 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 KRT32Q14532 448 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 ABCB5Q2M3G0 1257 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 FAM47AQ5JRC9 791 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 RASEFQ8IZ41 740 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 NCOA7Q8NI08 942 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 ESR2Q92731 530 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 ZKSCAN4Q969J2 545 aaPredicted RBP16.96■□□□□ 0.31
SMAD6-204ENST00000559931 CCDC17Q96LX7 622 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 C22orf23Q9BZE7 217 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 PICK1Q9NRD5 415 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 ABT1Q9ULW3 272 aaKnown RBP16.96■□□□□ 0.31
SMAD6-204ENST00000559931 TAF6LQ9Y6J9 622 aa16.96■□□□□ 0.31
SMAD6-204ENST00000559931 TSPY2A6NKD2 308 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 B4E1Z4 1266 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 RASA1P20936 1047 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 CAP2P40123 477 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 ANKRD13AQ8IZ07 590 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 CREBZFQ9NS37 354 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 ZNF112Q9UJU3 913 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMAD6-204ENST00000559931 SNX14Q9Y5W7 946 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 TACC3Q9Y6A5 838 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 NEDD4P46934 1319 aa16.95■□□□□ 0.3
SMAD6-204ENST00000559931 KDM4AO75164 1064 aa16.94■□□□□ 0.3
SMAD6-204ENST00000559931 GH2P01242 217 aa16.94■□□□□ 0.3
SMAD6-204ENST00000559931 FGRP09769 529 aa16.94■□□□□ 0.3
SMAD6-204ENST00000559931 AKR1B1P15121 316 aa16.94■□□□□ 0.3
SMAD6-204ENST00000559931 RRP1BQ14684 758 aaKnown RBP16.94■□□□□ 0.3
SMAD6-204ENST00000559931 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
SMAD6-204ENST00000559931 TSGA10IPQ3SY00 556 aa16.94■□□□□ 0.3
SMAD6-204ENST00000559931 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMAD6-204ENST00000559931 SLC10A4Q96EP9 437 aa16.94■□□□□ 0.3
SMAD6-204ENST00000559931 JAKMIP1Q96N16 626 aaKnown RBP16.94■□□□□ 0.3
SMAD6-204ENST00000559931 NEK1Q96PY6 1258 aa16.94■□□□□ 0.3
SMAD6-204ENST00000559931 CEP350Q5VT06 3117 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 ASNSP08243 561 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 PSMA5P28066 241 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 HUNKP57058 714 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 MAP3K11Q16584 847 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.93■□□□□ 0.3
SMAD6-204ENST00000559931 STOX1Q6ZVD7 989 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 KCNB2Q92953 911 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 ELP3Q9H9T3 547 aa16.93■□□□□ 0.3
SMAD6-204ENST00000559931 PAPPA2Q9BXP8 1791 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 ATP2B2Q01814 1243 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 VGLL4Q14135 290 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 LDLRAD1Q5T700 205 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 TMEM179Q6ZVK1 233 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 CLMNQ96JQ2 1002 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 GINM1Q9NU53 330 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 ZSWIM5Q9P217 1185 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 ZBTB21Q9ULJ3 1066 aa16.92■□□□□ 0.3
SMAD6-204ENST00000559931 ATAD5Q96QE3 1844 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 HMGB1P09429 215 aaKnown RBP16.91■□□□□ 0.3
SMAD6-204ENST00000559931 MCM5P33992 734 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 ANAPC15P60006 121 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 JAG1P78504 1218 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 SEPT2Q15019 361 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 SHROOM1Q2M3G4 852 aaPredicted RBP16.91■□□□□ 0.3
SMAD6-204ENST00000559931 ADCK5Q3MIX3 580 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 PAXIP1Q6ZW49 1069 aaPredicted RBP16.91■□□□□ 0.3
SMAD6-204ENST00000559931 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 IQCA1Q86XH1 822 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 ZKSCAN3Q9BRR0 538 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 UBAC1Q9BSL1 405 aa16.91■□□□□ 0.3
SMAD6-204ENST00000559931 UNCXA6NJT0 531 aa16.9■□□□□ 0.3
SMAD6-204ENST00000559931 USP17L5A8MUK1 530 aa16.9■□□□□ 0.3
SMAD6-204ENST00000559931 CASTP20810 708 aaKnown RBP16.9■□□□□ 0.3
SMAD6-204ENST00000559931 NT5C2P49902 561 aa16.9■□□□□ 0.3
SMAD6-204ENST00000559931 FGD1P98174 961 aa16.9■□□□□ 0.3
SMAD6-204ENST00000559931 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
SMAD6-204ENST00000559931 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
SMAD6-204ENST00000559931 KANSL2Q9H9L4 492 aa16.9■□□□□ 0.3
SMAD6-204ENST00000559931 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.9■□□□□ 0.3
SMAD6-204ENST00000559931 TLL2Q9Y6L7 1015 aa16.9■□□□□ 0.3
SMAD6-204ENST00000559931 ZHX2Q9Y6X8 837 aa16.9■□□□□ 0.3
SMAD6-204ENST00000559931 DOCK1Q14185 1865 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 ERICH2A1L162 156 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
SMAD6-204ENST00000559931 NMT2O60551 498 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 PTPRAP18433 802 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 ZNF157P51786 506 aaPredicted RBP16.89■□□□□ 0.29
SMAD6-204ENST00000559931 GRM1Q13255 1194 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.29
SMAD6-204ENST00000559931 DEFB115Q30KQ5 88 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 CCDC178Q5BJE1 867 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 CYB5R4Q7L1T6 521 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 DHX32Q7L7V1 743 aaKnown RBP16.89■□□□□ 0.29
SMAD6-204ENST00000559931 SAPCD2Q86UD0 394 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 CCDC84Q86UT8 332 aaPredicted RBP16.89■□□□□ 0.29
SMAD6-204ENST00000559931 AS3MTQ9HBK9 375 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
SMAD6-204ENST00000559931 SNCAIPQ9Y6H5 919 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms