RNA–Protein interactions for RNA: ENST00000559927.1

RAB8B-205, Transcript of RAB8B, member RAS oncogene family, humanhuman

TSL 5

Gene RAB8B, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8B-205ENST00000559927 NCOA3Q9Y6Q9 1424 aa8.7□□□□□ -1.02
RAB8B-205ENST00000559927 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 EPB41L2O43491 1005 aaKnown RBP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 RPLP1P05386 114 aaKnown RBP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 TPM2P07951 284 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 XRCC6P12956 609 aaKnown RBP eCLIP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 MSNP26038 577 aaKnown RBP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 GRIK4Q16099 956 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 KLHL40Q2TBA0 621 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 XKR5Q6UX68 686 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 PI16Q6UXB8 463 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 TXNRD3Q86VQ6 643 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 HSH2DQ96JZ2 352 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 OSBPL7Q9BZF2 842 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 LNPKQ9C0E8 428 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 CCSER2Q9H7U1 834 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 STK26Q9P289 416 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 FOXD3Q9UJU5 478 aaPredicted RBP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 USP20Q9Y2K6 914 aa8.69□□□□□ -1.02
RAB8B-205ENST00000559927 SOS1Q07889 1333 aaPredicted RBP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 COL3A1P02461 1466 aaPredicted RBP8.69□□□□□ -1.02
RAB8B-205ENST00000559927 TNFRSF21O75509 655 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 INPP5BP32019 993 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 IDH3AP50213 366 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 TERF1P54274 439 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 RACK1P63244 317 aaKnown RBP8.68□□□□□ -1.02
RAB8B-205ENST00000559927 LRP8Q14114 963 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 MBTPS1Q14703 1052 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
RAB8B-205ENST00000559927 TWISTNBQ3B726 338 aaPredicted RBP8.68□□□□□ -1.02
RAB8B-205ENST00000559927 NAP1L5Q96NT1 182 aaPredicted RBP8.68□□□□□ -1.02
RAB8B-205ENST00000559927 TANGO6Q9C0B7 1094 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 CAPN10Q9HC96 672 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 SPG7Q9UQ90 795 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 ABCC4O15439 1325 aa8.68□□□□□ -1.02
RAB8B-205ENST00000559927 CDK12Q9NYV4 1490 aaPredicted RBP8.68□□□□□ -1.02
RAB8B-205ENST00000559927 VAMP4O75379 141 aa8.67□□□□□ -1.02
RAB8B-205ENST00000559927 MBD3O95983 291 aa8.67□□□□□ -1.02
RAB8B-205ENST00000559927 EIF4BP23588 611 aaKnown RBP8.67□□□□□ -1.02
RAB8B-205ENST00000559927 PTPRMP28827 1452 aa8.67□□□□□ -1.02
RAB8B-205ENST00000559927 MCM5P33992 734 aa8.67□□□□□ -1.02
RAB8B-205ENST00000559927 CPSF1Q10570 1443 aaKnown RBP8.67□□□□□ -1.02
RAB8B-205ENST00000559927 EPS8L3Q8TE67 593 aaKnown RBP8.67□□□□□ -1.02
RAB8B-205ENST00000559927 TNPO1Q92973 898 aaKnown RBP8.67□□□□□ -1.02
RAB8B-205ENST00000559927 CCDC74AQ96AQ1 378 aa8.67□□□□□ -1.02
RAB8B-205ENST00000559927 PRKAG2Q9UGJ0 569 aa8.67□□□□□ -1.02
RAB8B-205ENST00000559927 KCNMB2Q9Y691 235 aa8.67□□□□□ -1.02
RAB8B-205ENST00000559927 DDX49Q9Y6V7 483 aaKnown RBP8.67□□□□□ -1.02
RAB8B-205ENST00000559927 KIF20BQ96Q89 1820 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 KIAA0232Q92628 1395 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 A0A0A0MRY4 1105 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 GRNP28799 593 aaKnown RBP8.66□□□□□ -1.02
RAB8B-205ENST00000559927 PTPN12Q05209 780 aaKnown RBP8.66□□□□□ -1.02
RAB8B-205ENST00000559927 TYRO3Q06418 890 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 ZNF394Q53GI3 561 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.66□□□□□ -1.02
RAB8B-205ENST00000559927 C8orf86Q6ZUL3 223 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 MTERF4Q7Z6M4 381 aaKnown RBP8.66□□□□□ -1.02
RAB8B-205ENST00000559927 TTC16Q8NEE8 873 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 MAP7D2Q96T17 732 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 GMLQ99445 158 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 SRCIN1Q9C0H9 1055 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 C12orf49Q9H741 205 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 DCTPP1Q9H773 170 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 DDX41Q9UJV9 622 aaKnown RBP8.66□□□□□ -1.02
RAB8B-205ENST00000559927 HDAC5Q9UQL6 1122 aa8.66□□□□□ -1.02
RAB8B-205ENST00000559927 DIP2CQ9Y2E4 1556 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 YEATS2Q9ULM3 1422 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 USP31Q70CQ4 1352 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 ZNF853P0CG23 659 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 DDIT3P35638 169 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 NASPP49321 788 aaPredicted RBP8.65□□□□□ -1.02
RAB8B-205ENST00000559927 CCT4P50991 539 aaKnown RBP8.65□□□□□ -1.02
RAB8B-205ENST00000559927 SAFB2Q14151 953 aaKnown RBP eCLIP8.65□□□□□ -1.02
RAB8B-205ENST00000559927 PCSK7Q16549 785 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 ZFYVE28Q9HCC9 887 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 SRA1Q9HD15 236 aaKnown RBP8.65□□□□□ -1.02
RAB8B-205ENST00000559927 POLKQ9UBT6 870 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 RTCBQ9Y3I0 505 aaKnown RBP8.65□□□□□ -1.02
RAB8B-205ENST00000559927 PCDHGB7Q9Y5F8 929 aa8.65□□□□□ -1.02
RAB8B-205ENST00000559927 ARHGEF40Q8TER5 1519 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 TTC21BQ7Z4L5 1316 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 SMARCA5O60264 1052 aaPredicted RBP8.64□□□□□ -1.03
RAB8B-205ENST00000559927 LETM1O95202 739 aaPredicted RBP8.64□□□□□ -1.03
RAB8B-205ENST00000559927 SELPP16109 830 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 ARSDP51689 593 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 ANAPC15P60006 121 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 HSP90AA2PQ14568 343 aaPredicted RBP8.64□□□□□ -1.03
RAB8B-205ENST00000559927 PDE12Q6L8Q7 609 aaKnown RBP8.64□□□□□ -1.03
RAB8B-205ENST00000559927 DPH6Q7L8W6 267 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 BTLAQ7Z6A9 289 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 ANKRD44Q8N8A2 993 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 SNX29Q8TEQ0 813 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 RTF1Q92541 710 aaKnown RBP8.64□□□□□ -1.03
RAB8B-205ENST00000559927 BHMTQ93088 406 aa8.64□□□□□ -1.03
RAB8B-205ENST00000559927 UBE2OQ9C0C9 1292 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms