RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 MPHOSPH10O00566 681 aaKnown RBP12.29□□□□□ -0.44
TPM1-221ENST00000559831 IFIT3O14879 490 aaKnown RBP12.29□□□□□ -0.44
TPM1-221ENST00000559831 CD2BP2O95400 341 aaKnown RBP12.29□□□□□ -0.44
TPM1-221ENST00000559831 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 TSPY3P0CV98 308 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 TSPY8P0CW00 308 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 AK2P54819 239 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
TPM1-221ENST00000559831 USP48Q86UV5 1035 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 HSCBQ8IWL3 235 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 TTC14Q96N46 770 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
TPM1-221ENST00000559831 UBAC1Q9BSL1 405 aa12.29□□□□□ -0.44
TPM1-221ENST00000559831 HERC5Q9UII4 1024 aaKnown RBP12.29□□□□□ -0.44
TPM1-221ENST00000559831 ERICH2A1L162 156 aa12.28□□□□□ -0.44
TPM1-221ENST00000559831 GDF11O95390 407 aa12.28□□□□□ -0.44
TPM1-221ENST00000559831 AKR1B1P15121 316 aa12.28□□□□□ -0.44
TPM1-221ENST00000559831 SART3Q15020 963 aaKnown RBP12.28□□□□□ -0.44
TPM1-221ENST00000559831 CERKLQ49MI3 558 aaPredicted RBP12.28□□□□□ -0.44
TPM1-221ENST00000559831 TMEM67Q5HYA8 995 aa12.28□□□□□ -0.44
TPM1-221ENST00000559831 DLK2Q6UY11 383 aa12.28□□□□□ -0.44
TPM1-221ENST00000559831 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
TPM1-221ENST00000559831 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
TPM1-221ENST00000559831 HOOK2Q96ED9 719 aa12.28□□□□□ -0.44
TPM1-221ENST00000559831 ZSCAN10Q96SZ4 725 aaPredicted RBP12.28□□□□□ -0.44
TPM1-221ENST00000559831 GLIS2Q9BZE0 524 aaPredicted RBP12.28□□□□□ -0.44
TPM1-221ENST00000559831 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
TPM1-221ENST00000559831 NAP1L2Q9ULW6 460 aaPredicted RBP12.28□□□□□ -0.44
TPM1-221ENST00000559831 WDR19Q8NEZ3 1342 aa12.28□□□□□ -0.44
TPM1-221ENST00000559831 DOCK1Q14185 1865 aa12.27□□□□□ -0.44
TPM1-221ENST00000559831 SH2B2O14492 632 aaPredicted RBP12.27□□□□□ -0.45
TPM1-221ENST00000559831 TBC1D12O60347 775 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 NMT2O60551 498 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 APOBRQ0VD83 1088 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 TOB2Q14106 344 aaPredicted RBP12.27□□□□□ -0.45
TPM1-221ENST00000559831 BECN1Q14457 450 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 WTAPQ15007 396 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 ANKRD1Q15327 319 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 SUPT20HL1Q3ZLR7 823 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 DCAF15Q66K64 600 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 MAP1SQ66K74 1059 aaPredicted RBP12.27□□□□□ -0.45
TPM1-221ENST00000559831 NFXL1Q6ZNB6 911 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 BRF1Q92994 677 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 SNX21Q969T3 373 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 TMEM87BQ96K49 555 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 TNKSO95271 1327 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 OTOFQ9HC10 1997 aa12.27□□□□□ -0.45
TPM1-221ENST00000559831 SSC5DA1L4H1 1573 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 NT5C2P49902 561 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 PRKG1Q13976 671 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
TPM1-221ENST00000559831 ABCB5Q2M3G0 1257 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 SHROOM1Q2M3G4 852 aaPredicted RBP12.26□□□□□ -0.45
TPM1-221ENST00000559831 TATDN1Q6P1N9 297 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 CDC37L1Q7L3B6 337 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 LDHDQ86WU2 507 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 IL27Q8NEV9 243 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 NEDD1Q8NHV4 660 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 IGDCC4Q8TDY8 1250 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 CDCA5Q96FF9 252 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 ZNF341Q9BYN7 854 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 ALDH8A1Q9H2A2 487 aaPredicted RBP12.26□□□□□ -0.45
TPM1-221ENST00000559831 SENP2Q9HC62 589 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 CABP5Q9NP86 173 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 ANGEL1Q9UNK9 670 aaKnown RBP12.26□□□□□ -0.45
TPM1-221ENST00000559831 FZD1Q9UP38 647 aa12.26□□□□□ -0.45
TPM1-221ENST00000559831 CCDC69A6NI79 296 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 K7ELQ4 463 aaPredicted RBP12.25□□□□□ -0.45
TPM1-221ENST00000559831 GH2P01242 217 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 MCM2P49736 904 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 IFIT1BQ5T764 474 aaKnown RBP12.25□□□□□ -0.45
TPM1-221ENST00000559831 CLEC10AQ8IUN9 316 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 ENAHQ8N8S7 591 aaPredicted RBP12.25□□□□□ -0.45
TPM1-221ENST00000559831 LY9Q9HBG7 655 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 GPBP1L1Q9HC44 474 aaPredicted RBP12.25□□□□□ -0.45
TPM1-221ENST00000559831 IL17RBQ9NRM6 502 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 PLIN4Q96Q06 1357 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 TRPM7Q96QT4 1865 aa12.25□□□□□ -0.45
TPM1-221ENST00000559831 KLF18A0A0U1RQI7 1052 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 NF2P35240 595 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 ATP2B2Q01814 1243 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 MAP3K10Q02779 954 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 STK3Q13188 491 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
TPM1-221ENST00000559831 SEPT2Q15019 361 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 SEC23AQ15436 765 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 TMEM179Q6ZVK1 233 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 RAB11FIP4Q86YS3 637 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 CEP95Q96GE4 821 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 WRNIP1Q96S55 665 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 MTA3Q9BTC8 594 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
TPM1-221ENST00000559831 AGXT2Q9BYV1 514 aa12.24□□□□□ -0.45
TPM1-221ENST00000559831 TCP11L1Q9NUJ3 509 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms