RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 OLFM4Q6UX06 510 aa11.54□□□□□ -0.56
LRRC28-216ENST00000559819 ENAHQ8N8S7 591 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-216ENST00000559819 PPP1R13BQ96KQ4 1090 aa11.54□□□□□ -0.56
LRRC28-216ENST00000559819 FOXP1Q9H334 677 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-216ENST00000559819 MAN1B1Q9UKM7 699 aa11.54□□□□□ -0.56
LRRC28-216ENST00000559819 CFAP100Q494V2 611 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 NOM1Q5C9Z4 860 aaKnown RBP11.53□□□□□ -0.56
LRRC28-216ENST00000559819 ESR2Q92731 530 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 CDCA7Q9BWT1 371 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-216ENST00000559819 MINPP1Q9UNW1 487 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 WNT7AO00755 349 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 FMR1Q06787 632 aaKnown RBP eCLIP11.53□□□□□ -0.56
LRRC28-216ENST00000559819 RILPL1Q5EBL4 403 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 TRMT44Q8IYL2 757 aaKnown RBP11.53□□□□□ -0.56
LRRC28-216ENST00000559819 FAM84BQ96KN1 310 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-216ENST00000559819 ZSCAN10Q96SZ4 725 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-216ENST00000559819 ZMYND15Q9H091 742 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 CSRNP2Q9H175 543 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 ZNF215Q9UL58 517 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-216ENST00000559819 JAG2Q9Y219 1238 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 RREB1Q92766 1687 aa11.53□□□□□ -0.56
LRRC28-216ENST00000559819 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.56
LRRC28-216ENST00000559819 POSTNQ15063 836 aa11.52□□□□□ -0.56
LRRC28-216ENST00000559819 PKN1Q16512 942 aa11.52□□□□□ -0.56
LRRC28-216ENST00000559819 TMTC2Q8N394 836 aa11.52□□□□□ -0.56
LRRC28-216ENST00000559819 GNL3LQ9NVN8 582 aaKnown RBP11.52□□□□□ -0.56
LRRC28-216ENST00000559819 TFCP2L1Q9NZI6 479 aa11.52□□□□□ -0.56
LRRC28-216ENST00000559819 ZNF652Q9Y2D9 606 aa11.52□□□□□ -0.56
LRRC28-216ENST00000559819 COL22A1Q8NFW1 1626 aaPredicted RBP11.52□□□□□ -0.56
LRRC28-216ENST00000559819 TBC1D9BQ66K14 1250 aa11.52□□□□□ -0.57
LRRC28-216ENST00000559819 PTF1AQ7RTS3 328 aa11.52□□□□□ -0.57
LRRC28-216ENST00000559819 INTS13Q9NVM9 706 aa11.52□□□□□ -0.57
LRRC28-216ENST00000559819 ANAPC4Q9UJX5 808 aa11.52□□□□□ -0.57
LRRC28-216ENST00000559819 NMT2O60551 498 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 SLC4A8Q2Y0W8 1093 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 IFIT1BQ5T764 474 aaKnown RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 SLC51AQ86UW1 340 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 BSDC1Q9NW68 430 aaPredicted RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 THRAP3Q9Y2W1 955 aaKnown RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 LAMB2P55268 1798 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 SPATA31A5Q5VU36 1347 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 SPATA31A7Q8IWB4 1347 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 CACNA1SQ13698 1873 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 A0A087X0B3 334 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 ACTN4O43707 911 aaKnown RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 CYP2D6P10635 497 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 GTF2E1P29083 439 aaPredicted RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 CASP1P29466 404 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 AKAP17AQ02040 695 aaKnown RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 FUT2Q10981 343 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 UBE4AQ14139 1066 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 CAVIN4Q5BKX8 364 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 CTR9Q6PD62 1173 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 SYT10Q6XYQ8 523 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 VSTM4Q8IW00 320 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 RNF26Q9BY78 433 aaPredicted RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 SRP68Q9UHB9 627 aaKnown RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 SRPRBQ9Y5M8 271 aaKnown RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 DUOX1Q9NRD9 1551 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 NRAPQ86VF7 1730 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 USP17L12C9JPN9 530 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 USP17L21D6R901 530 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 SF3B3Q15393 1217 aaKnown RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 FAM47AQ5JRC9 791 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 MED15Q96RN5 788 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 MTA3Q9BTC8 594 aa11.51□□□□□ -0.57
LRRC28-216ENST00000559819 AATFQ9NY61 560 aaKnown RBP eCLIP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 AHDC1Q5TGY3 1603 aaPredicted RBP11.51□□□□□ -0.57
LRRC28-216ENST00000559819 CBFA2T2O43439 604 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 CATIPQ7Z7H3 387 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 DHX58Q96C10 678 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 EPSTI1Q96J88 318 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 BAZ2AQ9UIF9 1905 aaKnown RBP11.5□□□□□ -0.57
LRRC28-216ENST00000559819 TOP1P11387 765 aaKnown RBP11.5□□□□□ -0.57
LRRC28-216ENST00000559819 KRT2P35908 639 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 MECOMQ03112 1051 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 MORC3Q14149 939 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 SYCP1Q15431 976 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 LRRN4CLQ8ND94 238 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 NSUN4Q96CB9 384 aaKnown RBP11.5□□□□□ -0.57
LRRC28-216ENST00000559819 PHF20Q9BVI0 1012 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 NFE2L3Q9Y4A8 694 aa11.5□□□□□ -0.57
LRRC28-216ENST00000559819 PSDA5PKW4 1024 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-216ENST00000559819 ADAMTS3O15072 1205 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 AFMP43652 599 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 SARSP49591 514 aaKnown RBP11.49□□□□□ -0.57
LRRC28-216ENST00000559819 RCAN1P53805 252 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 TROAPQ12815 778 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 ZNF174Q15697 407 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 CLEC4GQ6UXB4 293 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 SMARCC1Q92922 1105 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-216ENST00000559819 SAMSN1Q9NSI8 373 aaKnown RBP11.49□□□□□ -0.57
LRRC28-216ENST00000559819 A0A1B0GUL6 1792 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 TRIM75PA6NK02 468 aa11.49□□□□□ -0.57
LRRC28-216ENST00000559819 NPHP1O15259 732 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms