RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZNF326Q5BKZ1 582 aaKnown RBP6.61□□□□□ -1.35
SPG11-218ENST00000559754 SFRP5Q5T4F7 317 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 C22orf34Q6ZV56 151 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 HOMEZQ8IX15 550 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 SPACA3Q8IXA5 215 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 PHC3Q8NDX5 983 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 PI4K2BQ8TCG2 481 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 JARID2Q92833 1246 aaPredicted RBP6.61□□□□□ -1.35
SPG11-218ENST00000559754 ADAM30Q9UKF2 790 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 TLR6Q9Y2C9 796 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 LMNB2Q03252 620 aa6.6□□□□□ -1.35
SPG11-218ENST00000559754 PRAMEF13Q5VWM6 474 aa6.6□□□□□ -1.35
SPG11-218ENST00000559754 SLC6A19Q695T7 634 aa6.6□□□□□ -1.35
SPG11-218ENST00000559754 LETMD1Q6P1Q0 360 aa6.6□□□□□ -1.35
SPG11-218ENST00000559754 MRPL41Q8IXM3 137 aaKnown RBP6.6□□□□□ -1.35
SPG11-218ENST00000559754 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
SPG11-218ENST00000559754 FAM155AB1AL88 458 aaPredicted RBP6.59□□□□□ -1.35
SPG11-218ENST00000559754 ZNF865P0CJ78 1059 aaPredicted RBP6.59□□□□□ -1.35
SPG11-218ENST00000559754 IKZF1Q13422 519 aa6.59□□□□□ -1.35
SPG11-218ENST00000559754 CAMK2GQ13555 558 aaPredicted RBP6.59□□□□□ -1.35
SPG11-218ENST00000559754 NKPD1Q17RQ9 610 aa6.59□□□□□ -1.35
SPG11-218ENST00000559754 MFSD4AQ8N468 514 aa6.59□□□□□ -1.35
SPG11-218ENST00000559754 BCL2L13Q9BXK5 485 aa6.59□□□□□ -1.35
SPG11-218ENST00000559754 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
SPG11-218ENST00000559754 RC3H2Q9HBD1 1191 aaKnown RBP6.59□□□□□ -1.35
SPG11-218ENST00000559754 TJP2Q9UDY2 1190 aa6.59□□□□□ -1.35
SPG11-218ENST00000559754 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.58□□□□□ -1.36
SPG11-218ENST00000559754 ETV3P41162 512 aa6.58□□□□□ -1.36
SPG11-218ENST00000559754 KIR3DL1P43629 444 aa6.58□□□□□ -1.36
SPG11-218ENST00000559754 TAGLNQ01995 201 aaKnown RBP6.58□□□□□ -1.36
SPG11-218ENST00000559754 SLC23A3Q6PIS1 610 aa6.58□□□□□ -1.36
SPG11-218ENST00000559754 ATG4DQ86TL0 474 aaPredicted RBP6.58□□□□□ -1.36
SPG11-218ENST00000559754 MCATQ8IVS2 390 aaKnown RBP6.58□□□□□ -1.36
SPG11-218ENST00000559754 XAGE3Q8WTP9 111 aa6.58□□□□□ -1.36
SPG11-218ENST00000559754 TMEM87BQ96K49 555 aa6.58□□□□□ -1.36
SPG11-218ENST00000559754 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
SPG11-218ENST00000559754 PITPNM2Q9BZ72 1349 aa6.57□□□□□ -1.36
SPG11-218ENST00000559754 CILPO75339 1184 aa6.57□□□□□ -1.36
SPG11-218ENST00000559754 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
SPG11-218ENST00000559754 GBP2P32456 591 aaPredicted RBP6.57□□□□□ -1.36
SPG11-218ENST00000559754 CD96P40200 585 aa6.57□□□□□ -1.36
SPG11-218ENST00000559754 ZP2Q05996 745 aa6.57□□□□□ -1.36
SPG11-218ENST00000559754 BNC2Q6ZN30 1099 aaPredicted RBP6.57□□□□□ -1.36
SPG11-218ENST00000559754 GATAD2BQ8WXI9 593 aa6.57□□□□□ -1.36
SPG11-218ENST00000559754 MBNL3Q9NUK0 354 aaKnown RBP6.57□□□□□ -1.36
SPG11-218ENST00000559754 LMCD1Q9NZU5 365 aa6.57□□□□□ -1.36
SPG11-218ENST00000559754 ZBTB7CA1YPR0 619 aa6.56□□□□□ -1.36
SPG11-218ENST00000559754 PF4P02776 101 aa6.56□□□□□ -1.36
SPG11-218ENST00000559754 YARSP54577 528 aaKnown RBP6.56□□□□□ -1.36
SPG11-218ENST00000559754 THAP5Q7Z6K1 395 aa6.56□□□□□ -1.36
SPG11-218ENST00000559754 RIN3Q8TB24 985 aa6.56□□□□□ -1.36
SPG11-218ENST00000559754 RHOVQ96L33 236 aa6.56□□□□□ -1.36
SPG11-218ENST00000559754 GOLGA2P5Q9HBQ8 144 aa6.56□□□□□ -1.36
SPG11-218ENST00000559754 CAPN6Q9Y6Q1 641 aa6.56□□□□□ -1.36
SPG11-218ENST00000559754 FAM221AA4D161 298 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 PRR33A8MZF0 331 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 CBX7O95931 251 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 PLCG1P19174 1290 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 TMEM201Q5SNT2 666 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 SNAP47Q5SQN1 464 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 GIPC2Q8TF65 315 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 ACSF2Q96CM8 615 aaPredicted RBP6.55□□□□□ -1.36
SPG11-218ENST00000559754 HSPA12BQ96MM6 686 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 DPH2Q9BQC3 489 aaPredicted RBP6.55□□□□□ -1.36
SPG11-218ENST00000559754 ADAMTS6Q9UKP5 1117 aa6.55□□□□□ -1.36
SPG11-218ENST00000559754 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 F6X3S4 739 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 PAPLNO95428 1278 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 F13A1P00488 732 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 MPP2Q14168 576 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 TMCO4Q5TGY1 634 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 CDKAL1Q5VV42 579 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 CDH24Q86UP0 819 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 LRRN4CLQ8ND94 238 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 FAM13CQ8NE31 585 aa6.54□□□□□ -1.36
SPG11-218ENST00000559754 PIWIL2Q8TC59 973 aaKnown RBP6.54□□□□□ -1.36
SPG11-218ENST00000559754 PRR36Q9H6K5 1346 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 MINDY4BA8MYZ0 360 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 H3BS24 57 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 ERMP1Q7Z2K6 904 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 GOLM1Q8NBJ4 401 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 CYB5D2Q8WUJ1 264 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 CCDC120Q96HB5 630 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 SEMA3GQ9NS98 782 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 CEP131Q9UPN4 1083 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 CORINQ9Y5Q5 1042 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 ST14Q9Y5Y6 855 aa6.53□□□□□ -1.36
SPG11-218ENST00000559754 CNTNAP4Q9C0A0 1308 aa6.52□□□□□ -1.37
SPG11-218ENST00000559754 FAM160A1Q05DH4 1040 aa6.52□□□□□ -1.37
SPG11-218ENST00000559754 MLECQ14165 292 aa6.52□□□□□ -1.37
SPG11-218ENST00000559754 FLAD1Q8NFF5 587 aa6.52□□□□□ -1.37
SPG11-218ENST00000559754 KRTAP4-12Q9BQ66 201 aa6.52□□□□□ -1.37
SPG11-218ENST00000559754 ATP13A1Q9HD20 1204 aa6.52□□□□□ -1.37
SPG11-218ENST00000559754 KBTBD4Q9NVX7 518 aa6.52□□□□□ -1.37
SPG11-218ENST00000559754 ROBO2Q9HCK4 1378 aa6.52□□□□□ -1.37
SPG11-218ENST00000559754 YBX3P16989 372 aaKnown RBP eCLIP6.51□□□□□ -1.37
SPG11-218ENST00000559754 MRPL58Q14197 206 aaKnown RBP6.51□□□□□ -1.37
SPG11-218ENST00000559754 CWF19L2Q2TBE0 894 aaKnown RBP6.51□□□□□ -1.37
SPG11-218ENST00000559754 FAM196AQ6ZSG2 479 aa6.51□□□□□ -1.37
SPG11-218ENST00000559754 HS2ST1Q7LGA3 356 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms