RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-215ENST00000559201 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 MFSD14BQ5SR56 506 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 DCAF8Q5TAQ9 597 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 SASS6Q6UVJ0 657 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 TEX11Q8IYF3 940 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 SUPT20HQ8NEM7 779 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 SH3RF3Q8TEJ3 882 aaPredicted RBP12.4□□□□□ -0.42
LRRC49-215ENST00000559201 NUP133Q8WUM0 1156 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 MRPS27Q92552 414 aaKnown RBP12.4□□□□□ -0.42
LRRC49-215ENST00000559201 PHKBQ93100 1093 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 FUCA2Q9BTY2 467 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.42
LRRC49-215ENST00000559201 SENP2Q9HC62 589 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.4□□□□□ -0.42
LRRC49-215ENST00000559201 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
LRRC49-215ENST00000559201 A0A1B0GUL6 1792 aa12.4□□□□□ -0.42
LRRC49-215ENST00000559201 BMP15O95972 392 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 MMP1P03956 469 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 CMA1P23946 247 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 BTDP43251 543 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 FOSBP53539 338 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 TFAP4Q01664 338 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 TROAPQ12815 778 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 SLC15A2Q16348 729 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 C2CD5Q86YS7 1000 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 NKX2-3Q8TAU0 364 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 PDLIM2Q96JY6 352 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 TIGD1Q96MW7 591 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
LRRC49-215ENST00000559201 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
LRRC49-215ENST00000559201 RXRAP19793 462 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 HDLBPQ00341 1268 aaKnown RBP12.38□□□□□ -0.43
LRRC49-215ENST00000559201 CEBPZQ03701 1054 aaKnown RBP12.38□□□□□ -0.43
LRRC49-215ENST00000559201 OTUD7BQ6GQQ9 843 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 NOSTRINQ8IVI9 506 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 ENGASEQ8NFI3 743 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 FAM200AQ8TCP9 573 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.43
LRRC49-215ENST00000559201 PCDHA7Q9UN72 937 aa12.38□□□□□ -0.43
LRRC49-215ENST00000559201 CYP2D7A0A087X1C5 515 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 CUTAO60888 179 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 NR1I2O75469 434 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 PRDM1O75626 825 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 USP17L8P0C7I0 530 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 TSPY3P0CV98 308 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 TSPY8P0CW00 308 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 SMARCA1P28370 1054 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 GTF2IP78347 998 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 DIXDC1Q155Q3 683 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 C16orf86Q6ZW13 317 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 ELOA2Q8IYF1 753 aaPredicted RBP12.37□□□□□ -0.43
LRRC49-215ENST00000559201 STK11IPQ8N1F8 1099 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
LRRC49-215ENST00000559201 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 JAG2Q9Y219 1238 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 CLIC4Q9Y696 253 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 MAST2Q6P0Q8 1798 aa12.37□□□□□ -0.43
LRRC49-215ENST00000559201 FAM237AA0A1B0GTK4 181 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 TPM3P06753 285 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 CALML3P27482 149 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 RHBDL3P58872 404 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 TYRO3Q06418 890 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 FUT2Q10981 343 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 SF3B2Q13435 895 aaKnown RBP12.36□□□□□ -0.43
LRRC49-215ENST00000559201 GALNT17Q6IS24 598 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 DIS3L2Q8IYB7 885 aaKnown RBP12.36□□□□□ -0.43
LRRC49-215ENST00000559201 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
LRRC49-215ENST00000559201 CCDC34Q96HJ3 373 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 CAMKK2Q96RR4 588 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 NAT10Q9H0A0 1025 aaKnown RBP12.36□□□□□ -0.43
LRRC49-215ENST00000559201 CCDC39Q9UFE4 941 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 SWAP70Q9UH65 585 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 HOOK1Q9UJC3 728 aaKnown RBP12.36□□□□□ -0.43
LRRC49-215ENST00000559201 NOL7Q9UMY1 257 aaKnown RBP12.36□□□□□ -0.43
LRRC49-215ENST00000559201 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 MYO3BQ8WXR4 1341 aa12.36□□□□□ -0.43
LRRC49-215ENST00000559201 KIF28PB7ZC32 967 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 HAX1O00165 279 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
LRRC49-215ENST00000559201 CYP2D6P10635 497 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 KRT2P35908 639 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 SNW1Q13573 536 aaKnown RBP12.35□□□□□ -0.43
LRRC49-215ENST00000559201 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
LRRC49-215ENST00000559201 STRIP1Q5VSL9 837 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 MAPKAPK5Q8IW41 473 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 FMR1NBQ8N0W7 255 aaPredicted RBP12.35□□□□□ -0.43
LRRC49-215ENST00000559201 RNF214Q8ND24 703 aa12.35□□□□□ -0.43
LRRC49-215ENST00000559201 SLC16A10Q8TF71 515 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms