RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CRACR2BQ8N4Y2 399 aaPredicted RBP13.01□□□□□ -0.33
TPM1-217ENST00000559108 NEDD4P46934 1319 aa13.01□□□□□ -0.33
TPM1-217ENST00000559108 SPDYE5A6NIY4 337 aa13□□□□□ -0.33
TPM1-217ENST00000559108 SEC24BO95487 1268 aa13□□□□□ -0.33
TPM1-217ENST00000559108 GRM1Q13255 1194 aa13□□□□□ -0.33
TPM1-217ENST00000559108 DEFB115Q30KQ5 88 aa13□□□□□ -0.33
TPM1-217ENST00000559108 SCYL3Q8IZE3 742 aa13□□□□□ -0.33
TPM1-217ENST00000559108 MAP4K1Q92918 833 aa13□□□□□ -0.33
TPM1-217ENST00000559108 WNK4Q96J92 1243 aa13□□□□□ -0.33
TPM1-217ENST00000559108 HHIPL1Q96JK4 782 aa13□□□□□ -0.33
TPM1-217ENST00000559108 CAPNS2Q96L46 248 aa13□□□□□ -0.33
TPM1-217ENST00000559108 ANAPC4Q9UJX5 808 aa13□□□□□ -0.33
TPM1-217ENST00000559108 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
TPM1-217ENST00000559108 PARP14Q460N5 1801 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 CEP350Q5VT06 3117 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 CTNND1O60716 968 aaKnown RBP12.99□□□□□ -0.33
TPM1-217ENST00000559108 GH2P01242 217 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 CYP21A2P08686 494 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 FGRP09769 529 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 PTPRAP18433 802 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 ZNF157P51786 506 aaPredicted RBP12.99□□□□□ -0.33
TPM1-217ENST00000559108 MOGSQ13724 837 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 SPRYD7Q5W111 196 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 SIAH1Q8IUQ4 282 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 OPTNQ96CV9 577 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 HOOK2Q96ED9 719 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 NACAP1Q9BZK3 213 aa12.99□□□□□ -0.33
TPM1-217ENST00000559108 RBM8AQ9Y5S9 174 aaKnown RBP12.99□□□□□ -0.33
TPM1-217ENST00000559108 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
TPM1-217ENST00000559108 IRF6O14896 467 aa12.98□□□□□ -0.33
TPM1-217ENST00000559108 SEPT2Q15019 361 aa12.98□□□□□ -0.33
TPM1-217ENST00000559108 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
TPM1-217ENST00000559108 ANO2Q9NQ90 1003 aa12.98□□□□□ -0.33
TPM1-217ENST00000559108 RLFQ13129 1914 aa12.98□□□□□ -0.33
TPM1-217ENST00000559108 IGKV6D-41A0A0C4DH26 115 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 MFAP1P55081 439 aaKnown RBP12.97□□□□□ -0.33
TPM1-217ENST00000559108 NECTIN1Q15223 517 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 CERKLQ49MI3 558 aaPredicted RBP12.97□□□□□ -0.33
TPM1-217ENST00000559108 FAM47AQ5JRC9 791 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 ERO1BQ86YB8 467 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 MS4A4AQ96JQ5 239 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 AFG3L2Q9Y4W6 797 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 CSADQ9Y600 493 aa12.97□□□□□ -0.33
TPM1-217ENST00000559108 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 A0A1W2PRG0 241 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 UNCXA6NJT0 531 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 SLC27A2O14975 620 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 NMT2O60551 498 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 ECE1P42892 770 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 KIF23Q02241 960 aaPredicted RBP12.96□□□□□ -0.33
TPM1-217ENST00000559108 ABCB5Q2M3G0 1257 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 PTPN18Q99952 460 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 TRIM34Q9BYJ4 488 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 IL17RBQ9NRM6 502 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.33
TPM1-217ENST00000559108 ORC4O43929 436 aa12.95□□□□□ -0.34
TPM1-217ENST00000559108 PPIL2Q13356 520 aa12.95□□□□□ -0.34
TPM1-217ENST00000559108 AKNAD1Q5T1N1 836 aa12.95□□□□□ -0.34
TPM1-217ENST00000559108 BRI3BPQ8WY22 251 aa12.95□□□□□ -0.34
TPM1-217ENST00000559108 KCNH4Q9UQ05 1017 aa12.95□□□□□ -0.34
TPM1-217ENST00000559108 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
TPM1-217ENST00000559108 TRIM75PA6NK02 468 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
TPM1-217ENST00000559108 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
TPM1-217ENST00000559108 ZNF213O14771 459 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 ASNSP08243 561 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
TPM1-217ENST00000559108 PPATQ06203 517 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 SPP2Q13103 211 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 RAB3GAP1Q15042 981 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 CREB3L3Q68CJ9 461 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 RASGRP2Q7LDG7 609 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 AMOTL1Q8IY63 956 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 PICK1Q9NRD5 415 aa12.94□□□□□ -0.34
TPM1-217ENST00000559108 USP17L5A8MUK1 530 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 B4E1Z4 1266 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 E7EWF7 191 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 ANTXR2P58335 489 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 TFAP4Q01664 338 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
TPM1-217ENST00000559108 ADCK5Q3MIX3 580 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 RRP12Q5JTH9 1297 aaKnown RBP12.93□□□□□ -0.34
TPM1-217ENST00000559108 RCSD1Q6JBY9 416 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 GPAT2Q6NUI2 795 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 TMEM179Q6ZVK1 233 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 NEDD1Q8NHV4 660 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 KCNB2Q92953 911 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 CCDC102AQ96A19 550 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms