RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, human

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF111-204	ENST00000559077	LRP10	Q7Z4F1	713 aa		10.47	□□□□□ -0.73
RNF111-204	ENST00000559077	TXNRD3	Q86VQ6	643 aa		10.47	□□□□□ -0.73
RNF111-204	ENST00000559077	LINS1	Q8NG48	757 aa		10.47	□□□□□ -0.73
RNF111-204	ENST00000559077	KRTAP9-9	Q9BYP9	154 aa		10.47	□□□□□ -0.73
RNF111-204	ENST00000559077	KRTAP9-4	Q9BYQ2	154 aa		10.47	□□□□□ -0.73
RNF111-204	ENST00000559077	SRCIN1	Q9C0H9	1055 aa		10.47	□□□□□ -0.73
RNF111-204	ENST00000559077	PRDM6	Q9NQX0	595 aa		10.47	□□□□□ -0.73
RNF111-204	ENST00000559077	STARD13	Q9Y3M8	1113 aa		10.47	□□□□□ -0.73
RNF111-204	ENST00000559077	PRAMEF22	A3QJZ6	481 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	PI4KAP2	A4QPH2	592 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	RPS6KA4	O75676	772 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	A1BG	P04217	495 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	MYL6B	P14649	208 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	EIF5	P55010	431 aa	Known RBP	10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	TEAD4	Q15561	434 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	CCDC102B	Q68D86	513 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	COPS6	Q7L5N1	327 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	TRIM50	Q86XT4	487 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	ITPRIP	Q8IWB1	547 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	PI4KAP1	Q8N8J0	262 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	XAGE3	Q8WTP9	111 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	C7orf43	Q8WVR3	580 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	SLC30A3	Q99726	388 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	RTCB	Q9Y3I0	505 aa	Known RBP	10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	MAP3K15	Q6ZN16	1313 aa		10.46	□□□□□ -0.73
RNF111-204	ENST00000559077	TAF1L	Q8IZX4	1826 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	C4B	P0C0L5	1744 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	COL15A1	P39059	1388 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	PLIN1	O60240	522 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	LILRB5	O75023	590 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	DKK1	O94907	266 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	NID1	P14543	1247 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	SSFA2	P28290	1259 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	NOS2	P35228	1153 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	RAC1	P63000	192 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	SFSWAP	Q12872	951 aa	Known RBP	10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	ITPK1	Q13572	414 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	COL9A3	Q14050	684 aa	Predicted RBP	10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	ADGRE1	Q14246	886 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	INTS5	Q6P9B9	1019 aa	Known RBP	10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	METTL22	Q9BUU2	404 aa	Predicted RBP	10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	PHAX	Q9H814	394 aa	Known RBP	10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	ZNF232	Q9UNY5	417 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	ZBTB1	Q9Y2K1	713 aa		10.45	□□□□□ -0.74
RNF111-204	ENST00000559077	ADCY9	O60503	1353 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	EML1	O00423	815 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	TCERG1	O14776	1098 aa	Known RBP	10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	NRG1	Q02297	640 aa	Predicted RBP	10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	TXNRD1	Q16881	649 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	PROSER3	Q2NL68	480 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	G2E3	Q7L622	706 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	OGFOD1	Q8N543	542 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	TMEM57	Q8N5G2	664 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	CCDC191	Q8NCU4	936 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	GLMN	Q92990	594 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	TNFRSF25	Q93038	417 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	PPP4R2	Q9NY27	417 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	MKRN1	Q9UHC7	482 aa	Known RBP	10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	MAP3K2	Q9Y2U5	619 aa		10.44	□□□□□ -0.74
RNF111-204	ENST00000559077	ELN	P15502	786 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	SELP	P16109	830 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	SPEM2	Q0P670	501 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	AIMP1	Q12904	312 aa	Known RBP	10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	PARP10	Q53GL7	1025 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	BEND3	Q5T5X7	828 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	SLC4A10	Q6U841	1118 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	LINC00116	Q8NCU8	138 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	PANK1	Q8TE04	598 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	MDFI	Q99750	246 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	IGFLR1	Q9H665	355 aa		10.43	□□□□□ -0.74
RNF111-204	ENST00000559077	EP400	Q96L91	3159 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	NUP188	Q5SRE5	1749 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	RLBP1	P12271	317 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	ATP1A2	P50993	1020 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	SHISA2	Q6UWI4	295 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	KRTAP19-1	Q8IUB9	90 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	ZNF594	Q96JF6	807 aa	Predicted RBP	10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	CRBN	Q96SW2	442 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	ZBTB40	Q9NUA8	1239 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	ARFGEF2	Q9Y6D5	1785 aa		10.42	□□□□□ -0.74
RNF111-204	ENST00000559077	SCN7A	Q01118	1682 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	UTY	O14607	1347 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077		A0A0A0MRY4	1105 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	SFI1	A8K8P3	1242 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	HMMR	O75330	724 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	ANXA1	P04083	346 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	UBTFL1	P0CB47	393 aa	Predicted RBP	10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	TCIRG1	Q13488	830 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	C20orf194	Q5TEA3	1177 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	PTF1A	Q7RTS3	328 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	SIX5	Q8N196	739 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	TSEN2	Q8NCE0	465 aa	Known RBP	10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	CWC25	Q9NXE8	425 aa	Predicted RBP	10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	NARF	Q9UHQ1	456 aa		10.41	□□□□□ -0.74
RNF111-204	ENST00000559077	BCOR	Q6W2J9	1755 aa		10.4	□□□□□ -0.74
RNF111-204	ENST00000559077	MYH14	Q7Z406	1995 aa	Known RBP	10.4	□□□□□ -0.74
RNF111-204	ENST00000559077	SERTM1	A2A2V5	107 aa		10.4	□□□□□ -0.74
RNF111-204	ENST00000559077		F6X3S4	739 aa		10.4	□□□□□ -0.74

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