RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TRIM34Q9BYJ4 488 aa14.58□□□□□ -0.08
TPM1-216ENST00000558910 PALD1Q9ULE6 856 aa14.58□□□□□ -0.08
TPM1-216ENST00000558910 CRHR2Q13324 411 aa14.57□□□□□ -0.08
TPM1-216ENST00000558910 TAF1CQ15572 869 aaPredicted RBP14.57□□□□□ -0.08
TPM1-216ENST00000558910 OTUD7BQ6GQQ9 843 aa14.57□□□□□ -0.08
TPM1-216ENST00000558910 FAM43AQ8N2R8 423 aa14.57□□□□□ -0.08
TPM1-216ENST00000558910 CRACR2BQ8N4Y2 399 aaPredicted RBP14.57□□□□□ -0.08
TPM1-216ENST00000558910 PTCD2Q8WV60 388 aaKnown RBP14.57□□□□□ -0.08
TPM1-216ENST00000558910 LARP6Q9BRS8 491 aaKnown RBP14.57□□□□□ -0.08
TPM1-216ENST00000558910 PICK1Q9NRD5 415 aa14.57□□□□□ -0.08
TPM1-216ENST00000558910 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
TPM1-216ENST00000558910 SUPT16HQ9Y5B9 1047 aaKnown RBP14.57□□□□□ -0.08
TPM1-216ENST00000558910 ZHX2Q9Y6X8 837 aa14.57□□□□□ -0.08
TPM1-216ENST00000558910 ZNF532Q9HCE3 1301 aa14.57□□□□□ -0.08
TPM1-216ENST00000558910 RFX7Q2KHR2 1363 aa14.57□□□□□ -0.08
TPM1-216ENST00000558910 MAGEB6P1A0A0J9YX57 407 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 UNCXA6NJT0 531 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 PDE6AP16499 860 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 INHBEP58166 350 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 SNAPC2Q13487 334 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 TTF1Q15361 905 aaPredicted RBP14.56□□□□□ -0.08
TPM1-216ENST00000558910 GADL1Q6ZQY3 521 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 SPRYD3Q8NCJ5 442 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 EXOC6Q8TAG9 804 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 DCTPP1Q9H773 170 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 FLT1P17948 1338 aa14.56□□□□□ -0.08
TPM1-216ENST00000558910 TRIM75PA6NK02 468 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 PHF20L1A8MW92 1017 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 BTBD19C9JJ37 291 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 FKTNO75072 461 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 GDF11O95390 407 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 ALDH1A1P00352 501 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 CETPP11597 493 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 PPIL2Q13356 520 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 SHROOM1Q2M3G4 852 aaPredicted RBP14.55□□□□□ -0.08
TPM1-216ENST00000558910 SCYL3Q8IZE3 742 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 OTUD7AQ8TE49 926 aaPredicted RBP14.55□□□□□ -0.08
TPM1-216ENST00000558910 ARMT1Q9H993 441 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 ZNF112Q9UJU3 913 aa14.55□□□□□ -0.08
TPM1-216ENST00000558910 ATP5JP18859 108 aa14.54□□□□□ -0.08
TPM1-216ENST00000558910 PPP4CP60510 307 aa14.54□□□□□ -0.08
TPM1-216ENST00000558910 PPATQ06203 517 aa14.54□□□□□ -0.08
TPM1-216ENST00000558910 RRP1BQ14684 758 aaKnown RBP14.54□□□□□ -0.08
TPM1-216ENST00000558910 ANKRD45Q5TZF3 282 aa14.54□□□□□ -0.08
TPM1-216ENST00000558910 CTU1Q7Z7A3 348 aaKnown RBP14.54□□□□□ -0.08
TPM1-216ENST00000558910 CD99L2Q8TCZ2 262 aa14.54□□□□□ -0.08
TPM1-216ENST00000558910 LHX6Q9UPM6 363 aa14.54□□□□□ -0.08
TPM1-216ENST00000558910 ATRNL1Q5VV63 1379 aa14.54□□□□□ -0.08
TPM1-216ENST00000558910 HLA-DOAP06340 250 aa14.53□□□□□ -0.08
TPM1-216ENST00000558910 PTPRAP18433 802 aa14.53□□□□□ -0.08
TPM1-216ENST00000558910 B4GALNT3Q6L9W6 998 aa14.53□□□□□ -0.08
TPM1-216ENST00000558910 LCORLQ8N3X6 602 aa14.53□□□□□ -0.08
TPM1-216ENST00000558910 SDR42E1Q8WUS8 393 aa14.53□□□□□ -0.08
TPM1-216ENST00000558910 GPATCH3Q96I76 525 aa14.53□□□□□ -0.08
TPM1-216ENST00000558910 ZFYVE28Q9HCC9 887 aa14.53□□□□□ -0.08
TPM1-216ENST00000558910 ECHDC1Q9NTX5 307 aa14.53□□□□□ -0.08
TPM1-216ENST00000558910 DOCK2Q92608 1830 aa14.52□□□□□ -0.08
TPM1-216ENST00000558910 MAST2Q6P0Q8 1798 aa14.52□□□□□ -0.08
TPM1-216ENST00000558910 PRKAB2O43741 272 aa14.52□□□□□ -0.09
TPM1-216ENST00000558910 MBD4O95243 580 aa14.52□□□□□ -0.09
TPM1-216ENST00000558910 POLR3DP05423 398 aaPredicted RBP14.52□□□□□ -0.09
TPM1-216ENST00000558910 NOL9Q5SY16 702 aaKnown RBP14.52□□□□□ -0.09
TPM1-216ENST00000558910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.52□□□□□ -0.09
TPM1-216ENST00000558910 DDX27Q96GQ7 796 aaKnown RBP14.52□□□□□ -0.09
TPM1-216ENST00000558910 HAUS7Q99871 368 aa14.52□□□□□ -0.09
TPM1-216ENST00000558910 PI4KBQ9UBF8 816 aa14.52□□□□□ -0.09
TPM1-216ENST00000558910 CPA4Q9UI42 421 aa14.52□□□□□ -0.09
TPM1-216ENST00000558910 TRIM17Q9Y577 477 aa14.52□□□□□ -0.09
TPM1-216ENST00000558910 TESPA1A2RU30 521 aaPredicted RBP14.51□□□□□ -0.09
TPM1-216ENST00000558910 PDHXO00330 501 aa14.51□□□□□ -0.09
TPM1-216ENST00000558910 CTNND1O60716 968 aaKnown RBP14.51□□□□□ -0.09
TPM1-216ENST00000558910 STK11IPQ8N1F8 1099 aa14.51□□□□□ -0.09
TPM1-216ENST00000558910 ZNF687Q8N1G0 1237 aa14.51□□□□□ -0.09
TPM1-216ENST00000558910 RIOK1Q9BRS2 568 aaKnown RBP14.51□□□□□ -0.09
TPM1-216ENST00000558910 CRNKL1Q9BZJ0 848 aaKnown RBP14.51□□□□□ -0.09
TPM1-216ENST00000558910 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.51□□□□□ -0.09
TPM1-216ENST00000558910 CYP2C8P10632 490 aa14.5□□□□□ -0.09
TPM1-216ENST00000558910 CYP2D6P10635 497 aa14.5□□□□□ -0.09
TPM1-216ENST00000558910 JAG1P78504 1218 aa14.5□□□□□ -0.09
TPM1-216ENST00000558910 SP3Q02447 781 aa14.5□□□□□ -0.09
TPM1-216ENST00000558910 SPP2Q13103 211 aa14.5□□□□□ -0.09
TPM1-216ENST00000558910 MFSD10Q14728 455 aa14.5□□□□□ -0.09
TPM1-216ENST00000558910 DHX36Q9H2U1 1008 aaKnown RBP14.5□□□□□ -0.09
TPM1-216ENST00000558910 DNAJC18Q9H819 358 aa14.5□□□□□ -0.09
TPM1-216ENST00000558910 MCM9Q9NXL9 1143 aa14.5□□□□□ -0.09
TPM1-216ENST00000558910 TCRBV5S4A2TA0A5A2 114 aa14.49□□□□□ -0.09
TPM1-216ENST00000558910 MYCP01106 439 aaPredicted RBP14.49□□□□□ -0.09
TPM1-216ENST00000558910 ADD2P35612 726 aa14.49□□□□□ -0.09
TPM1-216ENST00000558910 CAP2P40123 477 aa14.49□□□□□ -0.09
TPM1-216ENST00000558910 PLCD1P51178 756 aa14.49□□□□□ -0.09
TPM1-216ENST00000558910 SOX10P56693 466 aa14.49□□□□□ -0.09
TPM1-216ENST00000558910 KCNH4Q9UQ05 1017 aa14.49□□□□□ -0.09
TPM1-216ENST00000558910 AFG3L2Q9Y4W6 797 aa14.49□□□□□ -0.09
TPM1-216ENST00000558910 CYP2D7A0A087X1C5 515 aa14.48□□□□□ -0.09
TPM1-216ENST00000558910 MPHOSPH10O00566 681 aaKnown RBP14.48□□□□□ -0.09
TPM1-216ENST00000558910 TBC1D12O60347 775 aa14.48□□□□□ -0.09
TPM1-216ENST00000558910 HMGCS2P54868 508 aa14.48□□□□□ -0.09
TPM1-216ENST00000558910 CAP1Q01518 475 aa14.48□□□□□ -0.09
TPM1-216ENST00000558910 MAP3K10Q02779 954 aa14.48□□□□□ -0.09
TPM1-216ENST00000558910 ZYXQ15942 572 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms