RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 TXNRD2Q9NNW7 524 aa16.53■□□□□ 0.24
VPS18-203ENST00000558855 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
VPS18-203ENST00000558855 FRMPD3Q5JV73 1810 aa16.53■□□□□ 0.24
VPS18-203ENST00000558855 ADCY3O60266 1144 aa16.52■□□□□ 0.24
VPS18-203ENST00000558855 PDE6AP16499 860 aa16.52■□□□□ 0.24
VPS18-203ENST00000558855 PLCD1P51178 756 aa16.52■□□□□ 0.24
VPS18-203ENST00000558855 FAM110CQ1W6H9 321 aa16.52■□□□□ 0.24
VPS18-203ENST00000558855 UBE2Q1Q7Z7E8 422 aa16.52■□□□□ 0.24
VPS18-203ENST00000558855 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.24
VPS18-203ENST00000558855 GOLIM4O00461 696 aa16.51■□□□□ 0.23
VPS18-203ENST00000558855 TNPO2O14787 897 aaKnown RBP16.51■□□□□ 0.23
VPS18-203ENST00000558855 GH2P01242 217 aa16.51■□□□□ 0.23
VPS18-203ENST00000558855 BACE1P56817 501 aa16.51■□□□□ 0.23
VPS18-203ENST00000558855 TRIM32Q13049 653 aa16.51■□□□□ 0.23
VPS18-203ENST00000558855 FOXP4Q8IVH2 680 aaPredicted RBP16.51■□□□□ 0.23
VPS18-203ENST00000558855 CRACR2BQ8N4Y2 399 aaPredicted RBP16.51■□□□□ 0.23
VPS18-203ENST00000558855 EMILIN3Q9NT22 766 aa16.51■□□□□ 0.23
VPS18-203ENST00000558855 DDX19BQ9UMR2 479 aa16.51■□□□□ 0.23
VPS18-203ENST00000558855 A0A0G2JMZ2 1700 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 INHAP05111 366 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 ASNSP08243 561 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 CYP2D6P10635 497 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 HOXD10P28358 340 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 GUCY1A2P33402 732 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 SHMT1P34896 483 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 USP5P45974 858 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 TATDN1Q6P1N9 297 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 RPAP2Q8IXW5 612 aaPredicted RBP16.5■□□□□ 0.23
VPS18-203ENST00000558855 LCORLQ8N3X6 602 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 KIF1BPQ96EK5 621 aa16.5■□□□□ 0.23
VPS18-203ENST00000558855 DNAJC2Q99543 621 aaKnown RBP16.5■□□□□ 0.23
VPS18-203ENST00000558855 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
VPS18-203ENST00000558855 ZNF532Q9HCE3 1301 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
VPS18-203ENST00000558855 GJA8P48165 433 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 MAP3K12Q12852 859 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
VPS18-203ENST00000558855 SLAIN1Q8ND83 568 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 RNF208Q9H0X6 261 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 AS3MTQ9HBK9 375 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 MORF4L1Q9UBU8 362 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 BIN2Q9UBW5 565 aaPredicted RBP16.49■□□□□ 0.23
VPS18-203ENST00000558855 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 PNMA3Q9UL41 463 aa16.49■□□□□ 0.23
VPS18-203ENST00000558855 PRKAB2O43741 272 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 HLA-DOAP06340 250 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 GJB1P08034 283 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 GABPAQ06546 454 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 IRF5Q13568 498 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 CLASRPQ8N2M8 674 aaKnown RBP16.48■□□□□ 0.23
VPS18-203ENST00000558855 SLC44A5Q8NCS7 719 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 EHD4Q9H223 541 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 BOLA2Q9H3K6 86 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 RBPJLQ9UBG7 517 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 TAOK2Q9UL54 1235 aa16.48■□□□□ 0.23
VPS18-203ENST00000558855 CEP290O15078 2479 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 COL11A1P12107 1806 aaPredicted RBP16.47■□□□□ 0.23
VPS18-203ENST00000558855 GREB1LQ9C091 1923 aaPredicted RBP16.47■□□□□ 0.23
VPS18-203ENST00000558855 MAGEB6P1A0A0J9YX57 407 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 IGSF3O75054 1194 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 HOXA7P31268 230 aaPredicted RBP16.47■□□□□ 0.23
VPS18-203ENST00000558855 HERVK_113P62684 666 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 Q3C1V9 767 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 HSP90AB4PQ58FF6 505 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 U2AF1L4Q8WU68 220 aaKnown RBP16.47■□□□□ 0.23
VPS18-203ENST00000558855 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
VPS18-203ENST00000558855 TRIM34Q9BYJ4 488 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 PORCNQ9H237 461 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 ARMT1Q9H993 441 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 SERPINB13Q9UIV8 391 aa16.47■□□□□ 0.23
VPS18-203ENST00000558855 H0YGN5 161 aa16.46■□□□□ 0.23
VPS18-203ENST00000558855 CNMDO75829 334 aa16.46■□□□□ 0.23
VPS18-203ENST00000558855 IFIT2P09913 472 aaKnown RBP16.46■□□□□ 0.23
VPS18-203ENST00000558855 GCLCP48506 637 aaPredicted RBP16.46■□□□□ 0.23
VPS18-203ENST00000558855 HABP4Q5JVS0 413 aaKnown RBP16.46■□□□□ 0.23
VPS18-203ENST00000558855 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
VPS18-203ENST00000558855 PXYLP1Q8TE99 480 aa16.46■□□□□ 0.23
VPS18-203ENST00000558855 CYP2D7A0A087X1C5 515 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 MS4A1P11836 297 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 ADD2P35612 726 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 UBXN2AP68543 259 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
VPS18-203ENST00000558855 KIAA1755Q5JYT7 1200 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 TRIB2Q92519 343 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 DCP1AQ9NPI6 582 aaPredicted RBP16.45■□□□□ 0.22
VPS18-203ENST00000558855 PAK6Q9NQU5 681 aaPredicted RBP16.45■□□□□ 0.22
VPS18-203ENST00000558855 PAG1Q9NWQ8 432 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 TMOD4Q9NZQ9 345 aa16.45■□□□□ 0.22
VPS18-203ENST00000558855 COLQQ9Y215 455 aaPredicted RBP16.45■□□□□ 0.22
VPS18-203ENST00000558855 A0A1W2PRG0 241 aa16.44■□□□□ 0.22
VPS18-203ENST00000558855 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
VPS18-203ENST00000558855 RAB11FIP3O75154 756 aa16.44■□□□□ 0.22
VPS18-203ENST00000558855 HMMRO75330 724 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms