RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 CCDC84Q86UT8 332 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 METTL16Q86W50 562 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 C7orf61Q8IZ16 206 aa12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 TDHQ8IZJ6 230 aa12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 DIS3LQ8TF46 1054 aaKnown RBP12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 MEIS3Q99687 375 aa12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 RAI14Q9P0K7 980 aa12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 LRP2BPQ9P2M1 347 aa12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL2-203ENST00000558791 CDK5RAP2Q96SN8 1893 aa12.96□□□□□ -0.33
CTDSPL2-203ENST00000558791 USP17L10C9JJH3 530 aa12.96□□□□□ -0.33
CTDSPL2-203ENST00000558791 SLURP2P0DP57 97 aa12.96□□□□□ -0.33
CTDSPL2-203ENST00000558791 PPP4CP60510 307 aa12.96□□□□□ -0.33
CTDSPL2-203ENST00000558791 ATF7IPQ6VMQ6 1270 aa12.96□□□□□ -0.33
CTDSPL2-203ENST00000558791 TRIB2Q92519 343 aa12.96□□□□□ -0.33
CTDSPL2-203ENST00000558791 STXBP5LQ9Y2K9 1186 aa12.96□□□□□ -0.33
CTDSPL2-203ENST00000558791 MAST2Q6P0Q8 1798 aa12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 FAM196BA6NMK8 535 aa12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 HERVK_113P62684 666 aa12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 G3BP1Q13283 466 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 CERS3Q8IU89 383 aa12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 CCAR1Q8IX12 1150 aaKnown RBP12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 DEFB123Q8N688 67 aa12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 TRIM34Q9BYJ4 488 aa12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 ZMYND8Q9ULU4 1186 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
CTDSPL2-203ENST00000558791 IPO8O15397 1037 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 GLRX3O76003 335 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 CYP2B6P20813 491 aa12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 RGS2P41220 211 aa12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 MAGEA10P43363 369 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 MTMR2Q13614 643 aa12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 NAA16Q6N069 864 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 TMED8Q6PL24 325 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP6NLQ92738 828 aa12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 P2RX7Q99572 595 aaKnown RBP12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
CTDSPL2-203ENST00000558791 GNAI2P04899 355 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 HLA-DOAP06340 250 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 COL6A1P12109 1028 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 MCAMP43121 646 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 ERVK-9P63128 1117 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 ERVK-24P63145 666 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 CCNA1P78396 465 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 TRIM32Q13049 653 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 RRP1BQ14684 758 aaKnown RBP12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 CRACR2BQ8N4Y2 399 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 UBE2OQ9C0C9 1292 aaKnown RBP12.93□□□□□ -0.34
CTDSPL2-203ENST00000558791 PFASO15067 1338 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 MYH1P12882 1939 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 MSCO60682 206 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 CACNB2Q08289 660 aaPredicted RBP12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 CCDC158Q5M9N0 1113 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 MORN1Q5T089 497 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 FAM109BQ6ICB4 259 aaPredicted RBP12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L2Q6R6M4 530 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 PI16Q6UXB8 463 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 ZNF512BQ96KM6 892 aaPredicted RBP12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 APBA2Q99767 749 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 MTMR10Q9NXD2 777 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 AATFQ9NY61 560 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 RBPJLQ9UBG7 517 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 RABGAP1Q9Y3P9 1069 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 FRMPD3Q5JV73 1810 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 DNAH12Q6ZR08 3092 aa12.92□□□□□ -0.34
CTDSPL2-203ENST00000558791 FLT1P17948 1338 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 SYN1P17600 705 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP14P54578 494 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 LHX8Q68G74 356 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 GPR142Q7Z601 462 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 C12orf42Q96LP6 360 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 TXNRD2Q9NNW7 524 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 ZBTB21Q9ULJ3 1066 aa12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L15C9J2P7 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L13C9JLJ4 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L11C9JVI0 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L18D6R9N7 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L22D6RA61 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L17D6RBQ6 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L19D6RCP7 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L20D6RJB6 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 USP17L24Q0WX57 530 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 MAP2K5Q13163 448 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 MFSD14CQ5VZR4 134 aa12.9□□□□□ -0.34
CTDSPL2-203ENST00000558791 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms