RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 UNC80Q8N2C7 3258 aa14.07□□□□□ -0.16
CASC4-205ENST00000558735 DOCK2Q92608 1830 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 MGAMO43451 1857 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
CASC4-205ENST00000558735 ELNP15502 786 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 ERC1Q8IUD2 1116 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 RPAP2Q8IXW5 612 aaPredicted RBP14.06□□□□□ -0.16
CASC4-205ENST00000558735 ANKLE1Q8NAG6 615 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 PROCA1Q8NCQ7 364 aaPredicted RBP14.06□□□□□ -0.16
CASC4-205ENST00000558735 RHPN1Q8TCX5 695 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 DEFB118Q96PH6 123 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 COG6Q9Y2V7 657 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 FLT1P17948 1338 aa14.06□□□□□ -0.16
CASC4-205ENST00000558735 HMGCS2P54868 508 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 SHROOM1Q2M3G4 852 aaPredicted RBP14.05□□□□□ -0.16
CASC4-205ENST00000558735 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 HSP90AB4PQ58FF6 505 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 SH3D19Q5HYK7 790 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 NECAB2Q7Z6G3 386 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 MAGEB6Q8N7X4 407 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 MIGA1Q8NAN2 632 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 WDR18Q9BV38 432 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 TBC1D2Q9BYX2 928 aa14.05□□□□□ -0.16
CASC4-205ENST00000558735 SAP30BPQ9UHR5 308 aaKnown RBP14.05□□□□□ -0.16
CASC4-205ENST00000558735 PHIPQ8WWQ0 1821 aa14.04□□□□□ -0.16
CASC4-205ENST00000558735 TNPO2O14787 897 aaKnown RBP14.04□□□□□ -0.16
CASC4-205ENST00000558735 ANKRD13CQ8N6S4 541 aa14.04□□□□□ -0.16
CASC4-205ENST00000558735 SMCR8Q8TEV9 937 aaPredicted RBP14.04□□□□□ -0.16
CASC4-205ENST00000558735 PAWRQ96IZ0 340 aaKnown RBP14.04□□□□□ -0.16
CASC4-205ENST00000558735 LAMA2P24043 3122 aaKnown RBP14.04□□□□□ -0.16
CASC4-205ENST00000558735 ASNSP08243 561 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 BACE1P56817 501 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 MAP3K12Q12852 859 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 FAM110CQ1W6H9 321 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 CRACR2BQ8N4Y2 399 aaPredicted RBP14.03□□□□□ -0.16
CASC4-205ENST00000558735 COA7Q96BR5 231 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 KIF1BPQ96EK5 621 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 ASCC2Q9H1I8 757 aaPredicted RBP14.03□□□□□ -0.16
CASC4-205ENST00000558735 AS3MTQ9HBK9 375 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 RCAN3Q9UKA8 241 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 DDX19BQ9UMR2 479 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 STXBP5LQ9Y2K9 1186 aa14.03□□□□□ -0.16
CASC4-205ENST00000558735 MYO5AQ9Y4I1 1855 aaKnown RBP14.03□□□□□ -0.16
CASC4-205ENST00000558735 DOCK1Q14185 1865 aa14.02□□□□□ -0.16
CASC4-205ENST00000558735 APBB1O00213 710 aa14.02□□□□□ -0.17
CASC4-205ENST00000558735 GDF11O95390 407 aa14.02□□□□□ -0.17
CASC4-205ENST00000558735 CLASRPQ8N2M8 674 aaKnown RBP14.02□□□□□ -0.17
CASC4-205ENST00000558735 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.02□□□□□ -0.17
CASC4-205ENST00000558735 PNMA3Q9UL41 463 aa14.02□□□□□ -0.17
CASC4-205ENST00000558735 C19orf81C9J6K1 198 aa14.01□□□□□ -0.17
CASC4-205ENST00000558735 HOXA7P31268 230 aaPredicted RBP14.01□□□□□ -0.17
CASC4-205ENST00000558735 USP5P45974 858 aa14.01□□□□□ -0.17
CASC4-205ENST00000558735 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
CASC4-205ENST00000558735 PABPC4Q13310 644 aaKnown RBP eCLIP14.01□□□□□ -0.17
CASC4-205ENST00000558735 MTMR2Q13614 643 aa14.01□□□□□ -0.17
CASC4-205ENST00000558735 TATDN1Q6P1N9 297 aa14.01□□□□□ -0.17
CASC4-205ENST00000558735 TMED8Q6PL24 325 aaPredicted RBP14.01□□□□□ -0.17
CASC4-205ENST00000558735 CERS3Q8IU89 383 aa14.01□□□□□ -0.17
CASC4-205ENST00000558735 DEFB123Q8N688 67 aa14.01□□□□□ -0.17
CASC4-205ENST00000558735 DIS3LQ8TF46 1054 aaKnown RBP14.01□□□□□ -0.17
CASC4-205ENST00000558735 P2RX7Q99572 595 aaKnown RBP14.01□□□□□ -0.17
CASC4-205ENST00000558735 RIOK1Q9BRS2 568 aaKnown RBP14.01□□□□□ -0.17
CASC4-205ENST00000558735 GINM1Q9NU53 330 aa14.01□□□□□ -0.17
CASC4-205ENST00000558735 PTPRFP10586 1907 aa14.01□□□□□ -0.17
CASC4-205ENST00000558735 ALPK3Q96L96 1907 aa14□□□□□ -0.17
CASC4-205ENST00000558735 USP17L10C9JJH3 530 aa14□□□□□ -0.17
CASC4-205ENST00000558735 RAB11FIP3O75154 756 aa14□□□□□ -0.17
CASC4-205ENST00000558735 HMMRO75330 724 aa14□□□□□ -0.17
CASC4-205ENST00000558735 HMGCRP04035 888 aa14□□□□□ -0.17
CASC4-205ENST00000558735 HLA-DOAP06340 250 aa14□□□□□ -0.17
CASC4-205ENST00000558735 PLCD1P51178 756 aa14□□□□□ -0.17
CASC4-205ENST00000558735 SLC9C2Q5TAH2 1124 aa14□□□□□ -0.17
CASC4-205ENST00000558735 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
CASC4-205ENST00000558735 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14□□□□□ -0.17
CASC4-205ENST00000558735 TRIM34Q9BYJ4 488 aa14□□□□□ -0.17
CASC4-205ENST00000558735 NBPF3Q9H094 633 aa14□□□□□ -0.17
CASC4-205ENST00000558735 BCL11AQ9H165 835 aa14□□□□□ -0.17
CASC4-205ENST00000558735 EMILIN3Q9NT22 766 aa14□□□□□ -0.17
CASC4-205ENST00000558735 MTMR10Q9NXD2 777 aa14□□□□□ -0.17
CASC4-205ENST00000558735 GJD2Q9UKL4 321 aa14□□□□□ -0.17
CASC4-205ENST00000558735 ZBTB21Q9ULJ3 1066 aa14□□□□□ -0.17
CASC4-205ENST00000558735 SIPA1L1O43166 1804 aa13.99□□□□□ -0.17
CASC4-205ENST00000558735 RPTORQ8N122 1335 aa13.99□□□□□ -0.17
CASC4-205ENST00000558735 PEX10O60683 326 aa13.99□□□□□ -0.17
CASC4-205ENST00000558735 GH2P01242 217 aa13.99□□□□□ -0.17
CASC4-205ENST00000558735 IFIT2P09913 472 aaKnown RBP13.99□□□□□ -0.17
CASC4-205ENST00000558735 TTF1Q15361 905 aaPredicted RBP13.99□□□□□ -0.17
CASC4-205ENST00000558735 TTC6Q86TZ1 520 aa13.99□□□□□ -0.17
CASC4-205ENST00000558735 EDC3Q96F86 508 aaKnown RBP13.99□□□□□ -0.17
CASC4-205ENST00000558735 TMOD4Q9NZQ9 345 aa13.99□□□□□ -0.17
CASC4-205ENST00000558735 OGDHLQ9ULD0 1010 aa13.99□□□□□ -0.17
CASC4-205ENST00000558735 DNAH12Q6ZR08 3092 aa13.99□□□□□ -0.17
CASC4-205ENST00000558735 DOCK3Q8IZD9 2030 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 MAGEB6P1A0A0J9YX57 407 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 TCRBV5S4A2TA0A5A2 114 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 GOLIM4O00461 696 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 PDE6AP16499 860 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 PDE3AQ14432 1141 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 MAP3K21Q5TCX8 1036 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 POTEEQ6S8J3 1075 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms