RNA–Protein interactions for RNA: ENST00000558292.1

HMBOX1-IT1-201, HMBOX1 intronic transcript 1, humanhuman

TSL 2 BASIC

Gene HMBOX1-IT1, Length 347 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-IT1-201ENST00000558292 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 GNRH1P01148 92 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 USP5P45974 858 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 GABPAQ06546 454 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 AAMPQ13685 434 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 UBE3CQ15386 1083 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 LCORLQ8N3X6 602 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 ARMC5Q96C12 935 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 RLFQ13129 1914 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 CYP2C8P10632 490 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 CTGFP29279 349 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 SPP2Q13103 211 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 TREML2Q5T2D2 321 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 GADL1Q6ZQY3 521 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 GPATCH3Q96I76 525 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 ARHGAP39Q9C0H5 1083 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 DCP1AQ9NPI6 582 aaPredicted RBP13.15□□□□□ -0.3
HMBOX1-IT1-201ENST00000558292 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 MBD4O95243 580 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SHMT1P34896 483 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 HMGCS2P54868 508 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 BACE1P56817 501 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 HDAC1Q13547 482 aaPredicted RBP13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SLC4A8Q2Y0W8 1093 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 TTC6Q86TZ1 520 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 KBTBD3Q8NAB2 608 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 TRIM34Q9BYJ4 488 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 CPA4Q9UI42 421 aa13.14□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 GDF11O95390 407 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 CHGBP05060 677 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PLCD1P51178 756 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PRMT2P55345 433 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SOX10P56693 466 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 KIF22Q14807 665 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SLFNL1Q499Z3 407 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ZSCAN25Q6NSZ9 544 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PI4K2BQ8TCG2 481 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SDR42E1Q8WUS8 393 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ARMT1Q9H993 441 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ATP8A2Q9NTI2 1148 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 GH2P01242 217 aa13.12□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 EVX2Q03828 476 aa13.12□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 MTMR2Q13614 643 aa13.12□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 C12orf42Q96LP6 360 aa13.12□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PTCH2Q9Y6C5 1203 aa13.12□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 C19orf81C9J6K1 198 aa13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 MLLT1Q03111 559 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 OTUD7AQ8TE49 926 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SMCR8Q8TEV9 937 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PUS7LQ9H0K6 701 aaKnown RBP13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ASCC2Q9H1I8 757 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 MCM9Q9NXL9 1143 aa13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SRRDQ9UH36 339 aa13.11□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 MYH4Q9Y623 1939 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 USP17L10C9JJH3 530 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ERC2O15083 957 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PRKAB2O43741 272 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 GLRX3O76003 335 aaKnown RBP13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 POLR3DP05423 398 aaPredicted RBP13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ZFYP08048 801 aaPredicted RBP13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 MX1P20591 662 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 OSBPP22059 807 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 PSMC4P43686 418 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 CERKLQ49MI3 558 aaPredicted RBP13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 C12orf60Q5U649 245 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 APPBP2Q92624 585 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 GCC1Q96CN9 775 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 MORF4L1Q9UBU8 362 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SWAP70Q9UH65 585 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ZNF236Q9UL36 1845 aa13.1□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 CYP2D6P10635 497 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 GUCY1A2P33402 732 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 FCGRTP55899 365 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 ABCB5Q2M3G0 1257 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 GIMAP6Q6P9H5 292 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 MYPNQ86TC9 1320 aa13.09□□□□□ -0.31
HMBOX1-IT1-201ENST00000558292 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms