RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 GREB1LQ9C091 1923 aaPredicted RBP12.41□□□□□ -0.42
LRRC28-204ENST00000558172 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 SMIM22K7EJ46 135 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 ORC4O43929 436 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 CYP21A2P08686 494 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 VGLL4Q14135 290 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 ABCB5Q2M3G0 1257 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 DEFB115Q30KQ5 88 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 ERO1BQ86YB8 467 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 STK11IPQ8N1F8 1099 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 SLC44A5Q8NCS7 719 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 CCDC102AQ96A19 550 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 CNNM2Q9H8M5 875 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
LRRC28-204ENST00000558172 MYH4Q9Y623 1939 aa12.41□□□□□ -0.42
LRRC28-204ENST00000558172 GDF11O95390 407 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.42
LRRC28-204ENST00000558172 RASA1P20936 1047 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 MCCP23508 829 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 ZNF157P51786 506 aaPredicted RBP12.4□□□□□ -0.42
LRRC28-204ENST00000558172 PPATQ06203 517 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 TRDNQ13061 729 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 RRP1BQ14684 758 aaKnown RBP12.4□□□□□ -0.42
LRRC28-204ENST00000558172 C8orf34Q49A92 452 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 CREB3L3Q68CJ9 461 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 CLMNQ96JQ2 1002 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 USP26Q9BXU7 913 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 KRT23Q9C075 422 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 ELP3Q9H9T3 547 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 AS3MTQ9HBK9 375 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 ZBTB21Q9ULJ3 1066 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
LRRC28-204ENST00000558172 PTPRFP10586 1907 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 SPDYE5A6NIY4 337 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
LRRC28-204ENST00000558172 SLC27A2O14975 620 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 PRDM1O75626 825 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 GH2P01242 217 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 TSPY3P0CV98 308 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 TSPY8P0CW00 308 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
LRRC28-204ENST00000558172 AKR1B1P15121 316 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 HSPA4P34932 840 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 ECE1P42892 770 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 PPP4R3BQ5MIZ7 849 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 TBC1D10CQ8IV04 446 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 ESR2Q92731 530 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 TOMM22Q9NS69 142 aa12.39□□□□□ -0.43
LRRC28-204ENST00000558172 TSPY2A6NKD2 308 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 E7EWF7 191 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
LRRC28-204ENST00000558172 PTPRAP18433 802 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 TFAP4Q01664 338 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 PPIL2Q13356 520 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 KRT32Q14532 448 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 CCDC178Q5BJE1 867 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 RRP12Q5JTH9 1297 aaKnown RBP12.38□□□□□ -0.43
LRRC28-204ENST00000558172 NCOA7Q8NI08 942 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 KCNB2Q92953 911 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 OPTNQ96CV9 577 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 WDR18Q9BV38 432 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
LRRC28-204ENST00000558172 CXCL11O14625 94 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 SLC10A3P09131 477 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 RAB3GAP1Q15042 981 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 SPRYD7Q5W111 196 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
LRRC28-204ENST00000558172 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
LRRC28-204ENST00000558172 RASAL3Q86YV0 1011 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 WNK4Q96J92 1243 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 AFG3L2Q9Y4W6 797 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 PLIN4Q96Q06 1357 aa12.37□□□□□ -0.43
LRRC28-204ENST00000558172 SEC24BO95487 1268 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 INHBEP58166 350 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 JAG1P78504 1218 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 NOGQ13253 232 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 SEPT2Q15019 361 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 FAM47AQ5JRC9 791 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 CYP4F22Q6NT55 531 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 IQCA1Q86XH1 822 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
LRRC28-204ENST00000558172 ZNF280CQ8ND82 737 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 SH2D4AQ9H788 454 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 UPF2Q9HAU5 1272 aaKnown RBP12.36□□□□□ -0.43
LRRC28-204ENST00000558172 ARHGEF10LQ9HCE6 1279 aa12.36□□□□□ -0.43
LRRC28-204ENST00000558172 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms